RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ERO1AQ96HE7 468 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 HSD3B7Q9H2F3 369 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.33
CLN6-223ENST00000637823 POLD4Q9HCU8 107 aa13.02□□□□□ -0.33
CLN6-223ENST00000637823 LARSQ9P2J5 1176 aaKnown RBP13.02□□□□□ -0.33
CLN6-223ENST00000637823 GNEQ9Y223 722 aaKnown RBP13.02□□□□□ -0.33
CLN6-223ENST00000637823 DYNC1LI2O43237 492 aaPredicted RBP13.01□□□□□ -0.33
CLN6-223ENST00000637823 AP5Z1O43299 807 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 HBP1O60381 514 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 FKTNO75072 461 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 PLS3P13797 630 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 PRKCZQ05513 592 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 PLCB4Q15147 1175 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 DGKDQ16760 1214 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 ODR4Q5SWX8 454 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 FAM102BQ5T8I3 360 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 TTI2Q6NXR4 508 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 FAM178BQ8IXR5 827 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 SLC17A8Q8NDX2 589 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 ZNF507Q8TCN5 953 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 CD99L2Q8TCZ2 262 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 NOC3LQ8WTT2 800 aaKnown RBP13.01□□□□□ -0.33
CLN6-223ENST00000637823 CEP89Q96ST8 783 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 SH2D3AQ9BRG2 576 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 AP5M1Q9H0R1 490 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 DHX33Q9H6R0 707 aaKnown RBP13.01□□□□□ -0.33
CLN6-223ENST00000637823 C17orf75Q9HAS0 396 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 ATP6V0A4Q9HBG4 840 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 ERAP1Q9NZ08 941 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 SRRDQ9UH36 339 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 KCNG1Q9UIX4 513 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 PCDHB13Q9Y5F0 798 aa13.01□□□□□ -0.33
CLN6-223ENST00000637823 A6NJR5 290 aa13□□□□□ -0.33
CLN6-223ENST00000637823 EIF3DO15371 548 aaKnown RBP eCLIP13□□□□□ -0.33
CLN6-223ENST00000637823 ADCY6O43306 1168 aa13□□□□□ -0.33
CLN6-223ENST00000637823 ADCY5O95622 1261 aa13□□□□□ -0.33
CLN6-223ENST00000637823 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
CLN6-223ENST00000637823 LGALS2P05162 132 aa13□□□□□ -0.33
CLN6-223ENST00000637823 MMP3P08254 477 aa13□□□□□ -0.33
CLN6-223ENST00000637823 AKR1A1P14550 325 aa13□□□□□ -0.33
CLN6-223ENST00000637823 ZNF18P17022 549 aa13□□□□□ -0.33
CLN6-223ENST00000637823 CDK11BP21127 795 aaKnown RBP13□□□□□ -0.33
CLN6-223ENST00000637823 POLGP54098 1239 aaPredicted RBP13□□□□□ -0.33
CLN6-223ENST00000637823 RTP1P59025 263 aa13□□□□□ -0.33
CLN6-223ENST00000637823 CAP1Q01518 475 aa13□□□□□ -0.33
CLN6-223ENST00000637823 LRRC63Q05C16 580 aa13□□□□□ -0.33
CLN6-223ENST00000637823 ALCAMQ13740 583 aa13□□□□□ -0.33
CLN6-223ENST00000637823 BMT2Q1RMZ1 405 aa13□□□□□ -0.33
CLN6-223ENST00000637823 BRDTQ58F21 947 aaPredicted RBP13□□□□□ -0.33
CLN6-223ENST00000637823 ZNF484Q5JVG2 852 aa13□□□□□ -0.33
CLN6-223ENST00000637823 ANKRD40Q6AI12 368 aa13□□□□□ -0.33
CLN6-223ENST00000637823 MAEAQ7L5Y9 396 aa13□□□□□ -0.33
CLN6-223ENST00000637823 ZNF720Q7Z2F6 126 aa13□□□□□ -0.33
CLN6-223ENST00000637823 GLIS3Q8NEA6 775 aa13□□□□□ -0.33
CLN6-223ENST00000637823 SCFD1Q8WVM8 642 aa13□□□□□ -0.33
CLN6-223ENST00000637823 TRIB2Q92519 343 aa13□□□□□ -0.33
CLN6-223ENST00000637823 TSG101Q99816 390 aa13□□□□□ -0.33
CLN6-223ENST00000637823 DUSP9Q99956 384 aaKnown RBP13□□□□□ -0.33
CLN6-223ENST00000637823 FGFBP2Q9BYJ0 223 aa13□□□□□ -0.33
CLN6-223ENST00000637823 TRIM5Q9C035 493 aa13□□□□□ -0.33
CLN6-223ENST00000637823 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
CLN6-223ENST00000637823 THAP9Q9H5L6 903 aa13□□□□□ -0.33
CLN6-223ENST00000637823 SAMSN1Q9NSI8 373 aaKnown RBP13□□□□□ -0.33
CLN6-223ENST00000637823 CEP350Q5VT06 3117 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 UBE4BO95155 1302 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 GAS2O43903 313 aaKnown RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 MAFO75444 373 aaPredicted RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 GCNT3O95395 438 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 MYBP10242 640 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 CYBAP13498 195 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 PTGS1P23219 599 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 NMT1P30419 496 aaKnown RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 CPT1AP50416 773 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 CASP5P51878 434 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 SMTNP53814 917 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 PMS1P54277 932 aaKnown RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 PRMT2P55345 433 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 FANCCQ00597 558 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 MAP2K1Q02750 393 aaPredicted RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 CCDC173Q0VFZ6 552 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 EMC2Q15006 297 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 KNOP1Q1ED39 458 aaKnown RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 CDKAL1Q5VV42 579 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 TLK2Q86UE8 772 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 TRIM50Q86XT4 487 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 TRPV1Q8NER1 839 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 SLC7A3Q8WY07 619 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 PPP1R9BQ96SB3 815 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 FIZ1Q96SL8 496 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 JPH2Q9BR39 696 aaPredicted RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 NTPCRQ9BSD7 190 aaKnown RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 C16orf70Q9BSU1 422 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 STRA6Q9BX79 667 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 SRRTQ9BXP5 876 aaKnown RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 ST6GALNAC4Q9H4F1 302 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 XPNPEP1Q9NQW7 623 aa12.99□□□□□ -0.33
CLN6-223ENST00000637823 ZNF215Q9UL58 517 aaPredicted RBP12.99□□□□□ -0.33
CLN6-223ENST00000637823 TRIM49BA6NDI0 452 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 ZBTB42B2RXF5 422 aa12.98□□□□□ -0.33
CLN6-223ENST00000637823 H3BRB1 525 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms