RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 NUDT16L1Q9BRJ7 211 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 ST7Q9NRC1 585 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 HELLSQ9NRZ9 838 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 SLC5A4Q9NY91 659 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 RRN3Q9NYV6 651 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 CEP72Q9P209 647 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 PDP2Q9P2J9 529 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 GIMAP2Q9UG22 337 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 ZNF112Q9UJU3 913 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 FBXL5Q9UKA1 691 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 BLOC1S6Q9UL45 172 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 LRRFIP2Q9Y608 721 aaKnown RBP3.43□□□□□ -1.86
VIM-210ENST00000637053 SLC4A7Q9Y6M7 1214 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 KDM2BQ8NHM5 1336 aa3.43□□□□□ -1.86
VIM-210ENST00000637053 PHLDB1Q86UU1 1377 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 A0A0B4J203 849 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 hCG_1642624A0A1W2PR95 340 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 PRAMEF27A3QJZ7 478 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 RASA4BC9J798 803 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 ELL2O00472 640 aaPredicted RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 ENC1O14682 589 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 N4BP3O15049 544 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MUSKO15146 869 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MATN3O15232 486 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CCP110O43303 1012 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 TLR5O60602 858 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CILPO75339 1184 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 E2F6O75461 281 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 IL33O95760 270 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 SLC4A1P02730 911 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CCDC172P0C7W6 258 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 SFTPCP11686 197 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 KRT10P13645 584 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MUTP22033 750 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CCNCP24863 283 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 HSPA4P34932 840 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 ATP6V1E1P36543 226 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MAGEA8P43361 318 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CDK8P49336 464 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MAN2A2P49641 1150 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 PDE6CP51160 858 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CSE1LP55060 971 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 LMNB2Q03252 620 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 TRIM14Q14142 442 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 SF3B3Q15393 1217 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 PPP2R5EQ16537 467 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 INF2Q27J81 1249 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MTERF2Q49AM1 385 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MINDY4Q4G0A6 757 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 METTL24Q5JXM2 366 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 GPATCH4Q5T3I0 446 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 HECTD3Q5T447 861 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 RETSATQ6NUM9 610 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 FIP1L1Q6UN15 594 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 LHFPL2Q6ZUX7 228 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 FAM129CQ86XR2 697 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 SIRT2Q8IXJ6 389 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 FAM186BQ8IYM0 893 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 SPATA5Q8NB90 893 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MSANTD4Q8NCY6 345 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 TDRD7Q8NHU6 1098 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 GSDMBQ8TAX9 411 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 BRSK1Q8TDC3 778 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CPLX3Q8WVH0 158 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 C17orf50Q8WW18 174 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CCT6BQ92526 530 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MAML1Q92585 1016 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 ZNF75CPQ92670 426 aaPredicted RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 TTC17Q96AE7 1141 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 GCC1Q96CN9 775 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 RSRC1Q96IZ7 334 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 TNIP3Q96KP6 325 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 UIMC1Q96RL1 719 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 BARD1Q99728 777 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 HAUS7Q99871 368 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 KATNAL1Q9BW62 490 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 GTPBP4Q9BZE4 634 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 WNT10AQ9GZT5 417 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 PDCL3Q9H2J4 239 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 DEF6Q9H4E7 631 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 FANCFQ9NPI8 374 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 KBTBD4Q9NVX7 518 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 IRAK4Q9NWZ3 460 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 WDR35Q9P2L0 1181 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 NFKBIL1Q9UBC1 381 aaPredicted RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.42□□□□□ -1.86
VIM-210ENST00000637053 DDX20Q9UHI6 824 aaKnown RBP3.42□□□□□ -1.86
VIM-210ENST00000637053 DUSP13Q9UII6 198 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 GPR160Q9UJ42 338 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 CFAP45Q9UL16 551 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 MAPRE3Q9UPY8 281 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 GPR52Q9Y2T5 361 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 N6AMT1Q9Y5N5 214 aa3.42□□□□□ -1.86
VIM-210ENST00000637053 UNC13AQ9UPW8 1703 aa3.41□□□□□ -1.86
VIM-210ENST00000637053 CCDC196A0A1B0GTZ2 297 aa3.41□□□□□ -1.86
VIM-210ENST00000637053 OR14I1A6ND48 311 aa3.41□□□□□ -1.86
VIM-210ENST00000637053 C2orf81A6NN90 581 aa3.41□□□□□ -1.86
VIM-210ENST00000637053 M0R3H8 397 aa3.41□□□□□ -1.86
VIM-210ENST00000637053 PLOD2O00469 737 aa3.41□□□□□ -1.86
VIM-210ENST00000637053 GABRDO14764 452 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms