RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SQORQ9Y6N5 450 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 SIP14410 1827 aa10.88□□□□□ -0.67
LINC00339-210ENST00000635675 A0A087WWV3 80 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 VWA3AA6NCI4 1184 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 GPR32O75388 356 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 F13A1P00488 732 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 TMOD1P28289 359 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 CDC25AP30304 524 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 CCT6AP40227 531 aaKnown RBP10.87□□□□□ -0.67
LINC00339-210ENST00000635675 RFC5P40937 340 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 DRP2Q13474 957 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 LPIN1Q14693 890 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 XKR9Q5GH70 373 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 FBXO47Q5MNV8 452 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 FOXD4L5Q5VV16 416 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-210ENST00000635675 HAUS3Q68CZ6 603 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 CNKSR3Q6P9H4 555 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 POTEGQ6S5H5 508 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 EXOC8Q8IYI6 725 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 LRRC71Q8N4P6 559 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 DBF4BQ8NFT6 615 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 FOXD4L4Q8WXT5 416 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-210ENST00000635675 NACC1Q96RE7 527 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 USP28Q96RU2 1077 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 JPH2Q9BR39 696 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-210ENST00000635675 DHX33Q9H6R0 707 aaKnown RBP10.87□□□□□ -0.67
LINC00339-210ENST00000635675 CDHR5Q9HBB8 845 aa10.87□□□□□ -0.67
LINC00339-210ENST00000635675 DBR1Q9UK59 544 aaKnown RBP10.87□□□□□ -0.67
LINC00339-210ENST00000635675 MORC2Q9Y6X9 1032 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-210ENST00000635675 LOXHD1Q8IVV2 1947 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 ABHD14A-ACY1A0A1B0GW23 586 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 M0QZ92 97 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 VTNP04004 478 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 ACTN1P12814 892 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 NASPP49321 788 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-210ENST00000635675 RARRES1P49788 294 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 CEBPZQ03701 1054 aaKnown RBP10.86□□□□□ -0.67
LINC00339-210ENST00000635675 SLC39A14Q15043 492 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 KRT79Q5XKE5 535 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 ZNF710Q8N1W2 664 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 USP38Q8NB14 1042 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 SNX29Q8TEQ0 813 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 SLC7A3Q8WY07 619 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 MAP7D2Q96T17 732 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 ADAMTS10Q9H324 1103 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 AGO3Q9H9G7 860 aaKnown RBP10.86□□□□□ -0.67
LINC00339-210ENST00000635675 KIAA1024Q9UPX6 916 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 ZDHHC9Q9Y397 364 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 ARID2Q68CP9 1835 aa10.86□□□□□ -0.67
LINC00339-210ENST00000635675 SOX1O00570 391 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 BRD1O95696 1058 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 GHRP10912 638 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 MARCKSP29966 332 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 DNM2P50570 870 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 CRYBB1P53674 252 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 POLGP54098 1239 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 NLRP11P59045 1033 aaKnown RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 GRIN1Q05586 938 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 IKBKEQ14164 716 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 KIZQ2M2Z5 673 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 HYIQ5T013 277 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 TSHZ1Q6ZSZ6 1077 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 SEPT8Q92599 483 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 AK8Q96MA6 479 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 ZNF396Q96N95 335 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 IFIH1Q9BYX4 1025 aaKnown RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 MTIF3Q9H2K0 278 aaKnown RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 XPNPEP1Q9NQW7 623 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 DDX19AQ9NUU7 478 aaKnown RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 SUCLA2Q9P2R7 463 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 TFIP11Q9UBB9 837 aaKnown RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 FBXO2Q9UK22 296 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 AKT3Q9Y243 479 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 GINS2Q9Y248 185 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 SRPRBQ9Y5M8 271 aaKnown RBP10.85□□□□□ -0.67
LINC00339-210ENST00000635675 MYH15Q9Y2K3 1946 aa10.85□□□□□ -0.67
LINC00339-210ENST00000635675 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 SLC26A4O43511 780 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 GAS2O43903 313 aaKnown RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 DGAT1O75907 488 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 CD52P31358 61 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 LONP1P36776 959 aaKnown RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 GPC3P51654 580 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 CDC42EP1Q00587 391 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 EMC2Q15006 297 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 FAM109BQ6ICB4 259 aaPredicted RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 LINC00301Q8NCQ3 95 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 TMEM40Q8WWA1 233 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 PRPF31Q8WWY3 499 aaKnown RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 APBB2Q92870 758 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 TMEM143Q96AN5 459 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 PPP1R16BQ96T49 567 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 OSMRQ99650 979 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 PADI3Q9ULW8 664 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 NOC2LQ9Y3T9 749 aaKnown RBP10.84□□□□□ -0.67
LINC00339-210ENST00000635675 SLC4A7Q9Y6M7 1214 aa10.84□□□□□ -0.67
LINC00339-210ENST00000635675 ZBBXA8MT70 800 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms