RNA–Protein interactions for RNA: ENST00000635137.1

PATJ-215, Transcript of PATJ, crumbs cell polarity complex component, human

TSL 1 (best) BASIC

Gene PATJ, Length 2,298 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PATJ-215	ENST00000635137	RSPH10B2	B2RC85	870 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	ZNF862	O60290	1169 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	USO1	O60763	962 aa	Known RBP	13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	GH1	P01241	217 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	OAT	P04181	439 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	HOXC6	P09630	235 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	RSPH10B	P0C881	870 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	PLS3	P13797	630 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	SCP2	P22307	547 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	TCF7	P36402	384 aa	Predicted RBP	13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	NR1I3	Q14994	352 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	MORN1	Q5T089	497 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	PLPPR4	Q7Z2D5	763 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	ZNF720	Q7Z2F6	126 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	CREBRF	Q8IUR6	639 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	SPATA33	Q96N06	139 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	NIFK	Q9BYG3	293 aa	Known RBP	13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	CYP26B1	Q9NR63	512 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	N4BP3	O15049	544 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	NRDC	O43847	1150 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	DEFB115	Q30KQ5	88 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	IQSEC1	Q6DN90	963 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	GOLGA5	Q8TBA6	731 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	SMARCAD1	Q9H4L7	1026 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	TRAF3IP3	Q9Y228	551 aa		13.83	□□□□□ -0.2
PATJ-215	ENST00000635137	SFI1	A8K8P3	1242 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137		H0YCG3	227 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	RGS2	P41220	211 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	RTP1	P59025	263 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	KRT31	Q15323	416 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	DNTTIP2	Q5QJE6	756 aa	Known RBP	13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	TAPT1	Q6NXT6	567 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	FILIP1	Q7Z7B0	1213 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	VSTM4	Q8IW00	320 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	BBX	Q8WY36	941 aa	Predicted RBP	13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	GLG1	Q92896	1179 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	EMID1	Q96A84	441 aa	Predicted RBP	13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	GPR20	Q99678	358 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	TMEM206	Q9H813	350 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	ATP6V0A4	Q9HBG4	840 aa		13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	TYW1	Q9NV66	732 aa	Known RBP	13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	CGN	Q9P2M7	1197 aa	Known RBP	13.82	□□□□□ -0.2
PATJ-215	ENST00000635137	CETN3	O15182	167 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	SORBS3	O60504	671 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	LGR5	O75473	907 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	STBD1	O95210	358 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	ARIH2	O95376	493 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	RFC5	P40937	340 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	COPB1	P53618	953 aa	Known RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	NPEPPS	P55786	919 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	CRHR2	Q13324	411 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.81	□□□□□ -0.2	3e-6	■■■■■ 32.9
PATJ-215	ENST00000635137	ZCWPW2	Q504Y3	356 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	FAM102B	Q5T8I3	360 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	HS2ST1	Q7LGA3	356 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	CCDC186	Q7Z3E2	898 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	TMC6	Q7Z403	805 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	SLC7A3	Q8WY07	619 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	KCTD10	Q9H3F6	313 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	ST6GALNAC4	Q9H4F1	302 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	CREBZF	Q9NS37	354 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	EMSY	Q7Z589	1322 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	TNPO2	O14787	897 aa	Known RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	SNAI1	O95863	264 aa	Predicted RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	MTIF2	P46199	727 aa	Known RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	POLG	P54098	1239 aa	Predicted RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	SNRPF	P62306	86 aa	Known RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	MAPK7	Q13164	816 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	DMP1	Q13316	513 aa	Predicted RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	ACVR2B	Q13705	512 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	PLA2G4F	Q68DD2	849 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	SPECC1L	Q69YQ0	1117 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	NELFCD	Q8IXH7	590 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	IFT74	Q96LB3	600 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	JPH2	Q9BR39	696 aa	Predicted RBP	13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	TUBGCP2	Q9BSJ2	902 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	DOCK3	Q8IZD9	2030 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	ARID2	Q68CP9	1835 aa		13.81	□□□□□ -0.2
PATJ-215	ENST00000635137	GAS2	O43903	313 aa	Known RBP	13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	TPM1	P09493	284 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	DNM2	P50570	870 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	CBX1	P83916	185 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	GRM1	Q13255	1194 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	ADAM9	Q13443	819 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	NFIL3	Q16649	462 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	HSDL1	Q3SXM5	330 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	OLFML2B	Q68BL8	750 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	CYP4F22	Q6NT55	531 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	APTX	Q7Z2E3	356 aa	Known RBP	13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	IRF2BP1	Q8IU81	584 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	DAW1	Q8N136	415 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	CCDC150	Q8NCX0	1101 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	GLIS3	Q8NEA6	775 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	HVCN1	Q96D96	273 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	CNOT6L	Q96LI5	555 aa	Known RBP	13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	PDGFC	Q9NRA1	345 aa		13.8	□□□□□ -0.2
PATJ-215	ENST00000635137	EXOC7	Q9UPT5	735 aa		13.8	□□□□□ -0.2

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