RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	JAM3	Q9BX67	310 aa		3.6	□□□□□ -1.83
SMARCB1-208	ENST00000634926	SMOC1	Q9H4F8	434 aa		3.6	□□□□□ -1.83
SMARCB1-208	ENST00000634926	COA3	Q9Y2R0	106 aa	Predicted RBP	3.6	□□□□□ -1.83
SMARCB1-208	ENST00000634926	TBX22	Q9Y458	520 aa		3.6	□□□□□ -1.83
SMARCB1-208	ENST00000634926	STRCP1	A6NGW2	1772 aa		3.6	□□□□□ -1.83
SMARCB1-208	ENST00000634926	CEP162	Q5TB80	1403 aa		3.6	□□□□□ -1.83
SMARCB1-208	ENST00000634926	A2M	P01023	1474 aa		3.6	□□□□□ -1.83
SMARCB1-208	ENST00000634926	SYNM	O15061	1565 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926		H7BY64	318 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	FBXO21	O94952	628 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	MRPS21	P82921	87 aa	Known RBP	3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	TOP3A	Q13472	1001 aa	Predicted RBP	3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	RAB33A	Q14088	237 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	EFCAB2	Q5VUJ9	269 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	LAIR1	Q6GTX8	287 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	ANKS3	Q6ZW76	656 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	LRP10	Q7Z4F1	713 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	GPR135	Q8IZ08	494 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	AFAP1	Q8N556	730 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	PIP4K2C	Q8TBX8	421 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	CPLX3	Q8WVH0	158 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	ZNF764	Q96H86	408 aa	Predicted RBP	3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	SHD	Q96IW2	340 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	CARD11	Q9BXL7	1154 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	CLDND1	Q9NY35	253 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	SIRPG	Q9P1W8	387 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	ARHGAP20	Q9P2F6	1191 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	PPARGC1A	Q9UBK2	798 aa	Known RBP	3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	PRKAG3	Q9UGI9	489 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	CDK11A	Q9UQ88	783 aa	Predicted RBP	3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	MRVI1	Q9Y6F6	885 aa		3.59	□□□□□ -1.83
SMARCB1-208	ENST00000634926	RTEL1-TNFRSF6B	F6WH68	1400 aa		3.59	□□□□□ -1.84
SMARCB1-208	ENST00000634926	A2ML1	A8K2U0	1454 aa		3.59	□□□□□ -1.84
SMARCB1-208	ENST00000634926	MED14	O60244	1454 aa		3.59	□□□□□ -1.84
SMARCB1-208	ENST00000634926	PZP	P20742	1482 aa		3.59	□□□□□ -1.84
SMARCB1-208	ENST00000634926	PRDM15	P57071	1507 aa	Predicted RBP	3.59	□□□□□ -1.84
SMARCB1-208	ENST00000634926	EP400	Q96L91	3159 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	FAH	P16930	419 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	NCL	P19338	710 aa	Known RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ECI1	P42126	302 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	GIPR	P48546	466 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	KRTAP10-7	P60409	375 aa	Predicted RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	LSAMP	Q13449	338 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	BMS1	Q14692	1282 aa	Known RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	PCOLCE	Q15113	449 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	TESK1	Q15569	626 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	CHRNA2	Q15822	529 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	TNNI3K	Q59H18	835 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	CD276	Q5ZPR3	534 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	E4F1	Q66K89	784 aa	Predicted RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	IQCE	Q6IPM2	695 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	SDE2	Q6IQ49	451 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	LARP4	Q71RC2	724 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	TMPRSS6	Q8IU80	811 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	OR6P1	Q8NGX9	317 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	TTLL11	Q8NHH1	800 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ANAPC16	Q96DE5	110 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	MRFAP1L1	Q96HT8	127 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	PRRX2	Q99811	253 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	TRIM55	Q9BYV6	548 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	KIAA1683	Q9H0B3	1180 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	AGO3	Q9H9G7	860 aa	Known RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	PLA2G3	Q9NZ20	509 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ARID4B	Q4LE39	1312 aa	Predicted RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ABCC3	O15438	1527 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	MED1	Q15648	1581 aa	Predicted RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	KDM5A	P29375	1690 aa	Known RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	IQGAP1	P46940	1657 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	UBR1	Q8IWV7	1749 aa		3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	XIRP1	Q702N8	1843 aa	Known RBP	3.58	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ESYT3	A0FGR9	886 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ZNF839	A8K0R7	811 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ACOT7	O00154	380 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	MEFV	O15553	781 aa	Predicted RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	DGKI	O75912	1065 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ZNF37A	P17032	561 aa	Predicted RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	CPS1	P31327	1500 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	GTF2A2	P52657	109 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	EIF6	P56537	245 aa	Known RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	TUSC3	Q13454	348 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	PAN2	Q504Q3	1202 aa	Known RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	LCE1A	Q5T7P2	110 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	MBNL2	Q5VZF2	373 aa	Known RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	ZKSCAN2	Q63HK3	967 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	EGFLAM	Q63HQ2	1017 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	CCDC141	Q6ZP82	1450 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	C19orf47	Q8N9M1	422 aa	Known RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	PHOSPHO1	Q8TCT1	267 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	HNRNPLL	Q8WVV9	542 aa	Known RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	C1orf159	Q96HA4	380 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	CHAMP1	Q96JM3	812 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	BBC3	Q96PG8	261 aa	Predicted RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	C12orf65	Q9H3J6	166 aa	Known RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	EPB41L1	Q9H4G0	881 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	R3HCC1	Q9Y3T6	440 aa	Known RBP	3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	NR2E1	Q9Y466	385 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	SLC12A7	Q9Y666	1083 aa		3.57	□□□□□ -1.84
SMARCB1-208	ENST00000634926	CEP152	O94986	1710 aa		3.56	□□□□□ -1.84
SMARCB1-208	ENST00000634926	MAP3K1	Q13233	1512 aa		3.56	□□□□□ -1.84
SMARCB1-208	ENST00000634926	NCOA2	Q15596	1464 aa		3.56	□□□□□ -1.84

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