RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 MPHOSPH9Q99550 1183 aa4.69□□□□□ -1.66
SCN1A-208ENST00000625916 KCNH7Q9NS40 1196 aa4.69□□□□□ -1.66
SCN1A-208ENST00000625916 HECAQ9UBI9 543 aaPredicted RBP4.69□□□□□ -1.66
SCN1A-208ENST00000625916 APEX1P27695 318 aaKnown RBP4.68□□□□□ -1.66
SCN1A-208ENST00000625916 ADAM15Q13444 863 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 CNGB1Q14028 1251 aaPredicted RBP4.68□□□□□ -1.66
SCN1A-208ENST00000625916 KRTAP15-1Q3LI76 137 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 FOXB2Q5VYV0 432 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 CKAP2LQ8IYA6 745 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 ANKRD35Q8N283 1001 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 RABGGTAQ92696 567 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 PRRX2Q99811 253 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 SH3BP1Q9Y3L3 701 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 ASB1Q9Y576 335 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 DMRT1Q9Y5R6 373 aa4.68□□□□□ -1.66
SCN1A-208ENST00000625916 STK10O94804 968 aaKnown RBP4.67□□□□□ -1.66
SCN1A-208ENST00000625916 PEX11BO96011 259 aa4.67□□□□□ -1.66
SCN1A-208ENST00000625916 STAT3P40763 770 aa4.67□□□□□ -1.66
SCN1A-208ENST00000625916 ATP2C1P98194 919 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-208ENST00000625916 TMEM132BQ14DG7 1078 aa4.67□□□□□ -1.66
SCN1A-208ENST00000625916 NOSTRINQ8IVI9 506 aa4.67□□□□□ -1.66
SCN1A-208ENST00000625916 ERCC4Q92889 916 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-208ENST00000625916 AGAP2Q99490 1192 aa4.67□□□□□ -1.66
SCN1A-208ENST00000625916 TTPALQ9BTX7 342 aa4.67□□□□□ -1.66
SCN1A-208ENST00000625916 DHRS4Q9BTZ2 278 aa4.67□□□□□ -1.66
SCN1A-208ENST00000625916 PPP1R1BQ9UD71 204 aaPredicted RBP4.67□□□□□ -1.66
SCN1A-208ENST00000625916 MSRB2Q9Y3D2 182 aa4.67□□□□□ -1.66
SCN1A-208ENST00000625916 HIP1RO75146 1068 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 H2AFYO75367 372 aaKnown RBP4.66□□□□□ -1.66
SCN1A-208ENST00000625916 RPS6KA4O75676 772 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 RASGRF1Q13972 1273 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 TM4SF20Q53R12 229 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 KLHDC10Q6PID8 442 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 ZNF662Q6ZS27 426 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 GSPT2Q8IYD1 628 aaKnown RBP4.66□□□□□ -1.66
SCN1A-208ENST00000625916 ULK2Q8IYT8 1036 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 GCDHQ92947 438 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-208ENST00000625916 LPPQ93052 612 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 MIEF2Q96C03 454 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 EXOC2Q96KP1 924 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 NDOR1Q9UHB4 597 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 COQ6Q9Y2Z9 468 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 VWA7Q9Y334 891 aa4.66□□□□□ -1.66
SCN1A-208ENST00000625916 CTDP1Q9Y5B0 961 aaPredicted RBP4.66□□□□□ -1.66
SCN1A-208ENST00000625916 SLC12A8A0AV02 714 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 TMEM191CA6NGB0 347 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 GOLGA8BA8MQT2 603 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 GOLGA6L22H0YM25 854 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 DIAPH1O60610 1272 aaKnown RBP4.65□□□□□ -1.67
SCN1A-208ENST00000625916 FAM153BP0C7A2 387 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 MAN2A2P49641 1150 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 SCNN1GP51170 649 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 SESN2P58004 480 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-208ENST00000625916 FSTL1Q12841 308 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 SAFB2Q14151 953 aaKnown RBP eCLIP4.65□□□□□ -1.67
SCN1A-208ENST00000625916 ACAP1Q15027 740 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 FSTL4Q6MZW2 842 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 Q6ZRM9 215 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 SLC7A6OSQ96CW6 309 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-208ENST00000625916 RPL10LQ96L21 214 aaKnown RBP4.65□□□□□ -1.67
SCN1A-208ENST00000625916 SLC6A15Q9H2J7 730 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 NRDE2Q9H7Z3 1164 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 SAE1Q9UBE0 346 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-208ENST00000625916 MAGEL2Q9UJ55 1249 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 MRPS23Q9Y3D9 190 aaKnown RBP4.65□□□□□ -1.67
SCN1A-208ENST00000625916 RBM8AQ9Y5S9 174 aaKnown RBP4.65□□□□□ -1.67
SCN1A-208ENST00000625916 B3GALT1Q9Y5Z6 326 aa4.65□□□□□ -1.67
SCN1A-208ENST00000625916 RASSF10A6NK89 507 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 EFCAB14O75071 495 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 SDHAP31040 664 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 ADCY7P51828 1080 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 ZC3H6P61129 1189 aaKnown RBP4.64□□□□□ -1.67
SCN1A-208ENST00000625916 SLC25A3Q00325 362 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 ALDH6A1Q02252 535 aaKnown RBP4.64□□□□□ -1.67
SCN1A-208ENST00000625916 ELAVL1Q15717 326 aaKnown RBP4.64□□□□□ -1.67
SCN1A-208ENST00000625916 LAIR1Q6GTX8 287 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 DPY19L2P1Q6NXN4 242 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 GAREM2Q75VX8 874 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 ANKRD53Q8N9V6 530 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 GFM2Q969S9 779 aaKnown RBP4.64□□□□□ -1.67
SCN1A-208ENST00000625916 MAGEB10Q96LZ2 347 aaPredicted RBP4.64□□□□□ -1.67
SCN1A-208ENST00000625916 CELF4Q9BZC1 486 aaKnown RBP4.64□□□□□ -1.67
SCN1A-208ENST00000625916 CCDC113Q9H0I3 377 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 SLC52A2Q9HAB3 445 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 KDM2BQ8NHM5 1336 aa4.64□□□□□ -1.67
SCN1A-208ENST00000625916 FOXN1O15353 648 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 MAFO75444 373 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-208ENST00000625916 RASGRP1O95267 797 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 KRT4P19013 534 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 BPIFB4P59827 614 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 CATSPEREQ5SY80 951 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 FAM111BQ6SJ93 734 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 PCSK4Q6UW60 755 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 BCL6BQ8N143 479 aaPredicted RBP4.63□□□□□ -1.67
SCN1A-208ENST00000625916 C2orf69Q8N8R5 385 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 DLG3Q92796 817 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 GPR87Q9BY21 358 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 GPRC5BQ9NZH0 403 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 DENND2AQ9ULE3 1009 aa4.63□□□□□ -1.67
SCN1A-208ENST00000625916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms