RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 GMCL1P1Q8NEA9 526 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 PPM1EQ8WY54 764 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 BORCS6Q96GS4 357 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.28□□□□□ -0.441e-7■■■■□ 26.1
VARS2-213ENST00000625423 IDI2Q9BXS1 227 aa12.28□□□□□ -0.44
VARS2-213ENST00000625423 KRIT1O00522 736 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 CLSTN1O94985 981 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 GH2P01242 217 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 ITGA4P13612 1032 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 NR1D1P20393 614 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 GUCY1A3Q02108 690 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 SLC27A3Q5K4L6 730 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 KDM7AQ6ZMT4 941 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 PODNQ7Z5L7 613 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 LNX1Q8TBB1 728 aaPredicted RBP12.27□□□□□ -0.44
VARS2-213ENST00000625423 DYDC2Q96IM9 177 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 TMX4Q9H1E5 349 aaPredicted RBP12.27□□□□□ -0.44
VARS2-213ENST00000625423 OLFML3Q9NRN5 406 aa12.27□□□□□ -0.44
VARS2-213ENST00000625423 ZMYM2Q9UBW7 1377 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 NDUFAB1O14561 156 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 EVI5O60447 810 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 ALDH1B1P30837 517 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 STAT1P42224 750 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 SLFN11Q7Z7L1 901 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 LMBR1Q8WVP7 490 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 ATP6V1G3Q96LB4 118 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 HSD17B14Q9BPX1 270 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 NEUROG2Q9H2A3 272 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 IGLV3-22A0A075B6J6 115 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 A6NNZ2 444 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 SLITRK3O94933 977 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 FERP16591 822 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 GAP43P17677 238 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 ANXA13P27216 316 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 PSMC2P35998 433 aaKnown RBP12.27□□□□□ -0.45
VARS2-213ENST00000625423 GALCP54803 685 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 SF3B2Q13435 895 aaKnown RBP12.27□□□□□ -0.45
VARS2-213ENST00000625423 TUBB8Q3ZCM7 444 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 TTC31Q49AM3 519 aaPredicted RBP12.27□□□□□ -0.45
VARS2-213ENST00000625423 GLYCTKQ8IVS8 523 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 CALR3Q96L12 384 aaKnown RBP12.27□□□□□ -0.45
VARS2-213ENST00000625423 WDR18Q9BV38 432 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 AMACRQ9UHK6 382 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 STXBP5LQ9Y2K9 1186 aa12.27□□□□□ -0.45
VARS2-213ENST00000625423 SIPA1L1O43166 1804 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 A0A1W2PRG0 241 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 GTPBP10A4D1E9 387 aaKnown RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 CYP3A4P08684 503 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 HSD17B3P37058 310 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 CUL1Q13616 776 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 C1orf186Q6ZWK4 172 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 TADA2BQ86TJ2 420 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 NT5DC3Q86UY8 548 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 OR2W6PQ8NHA6 318 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.45
VARS2-213ENST00000625423 CENPHQ9H3R5 247 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 OSGEPQ9NPF4 335 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 SUCLA2Q9P2R7 463 aaPredicted RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 PRR12Q9ULL5 1215 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 A0A087WUV0 522 aaPredicted RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 A0A0A6YYK5 440 aaPredicted RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 CFBP00751 764 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 LSP1P33241 339 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 UBXN2AP68543 259 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 OLIG1Q8TAK6 271 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 FAM107BQ9H098 131 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 F8VZ95 297 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 EIF3DO15371 548 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■■□□ 15.5
VARS2-213ENST00000625423 PPP1R12BO60237 982 aaPredicted RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 RXRBP28702 533 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 SOX5P35711 763 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 FMO5P49326 533 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 DRAP1Q14919 205 aaPredicted RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 UAP1Q16222 522 aaPredicted RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 LRCH2Q5VUJ6 765 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 SYCE1Q8N0S2 351 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 MICALL1Q8N3F8 863 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 RASGEF1CQ8N431 466 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.26□□□□□ -0.45
VARS2-213ENST00000625423 TDRD3Q9H7E2 651 aaKnown RBP12.26□□□□□ -0.45
VARS2-213ENST00000625423 PARVGQ9HBI0 331 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 DNAJC12Q9UKB3 198 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 INTUQ9ULD6 942 aa12.26□□□□□ -0.45
VARS2-213ENST00000625423 ABCB4P21439 1286 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 FLT3P36888 993 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 LIG3P49916 1009 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 CYP2J2P51589 502 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 PPARDQ03181 441 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 CBWD6Q4V339 395 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 CBWD3Q5JTY5 395 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 CBWD5Q5RIA9 395 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 DACT2Q5SW24 774 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 RBM26Q5T8P6 1007 aaKnown RBP12.25□□□□□ -0.45
VARS2-213ENST00000625423 EIF1ADQ8N9N8 165 aaKnown RBP12.25□□□□□ -0.45
VARS2-213ENST00000625423 SLC30A5Q8TAD4 765 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 TMBIM4Q9HC24 238 aa12.25□□□□□ -0.45
VARS2-213ENST00000625423 HMGB1P1B2RPK0 211 aaPredicted RBP12.25□□□□□ -0.45
VARS2-213ENST00000625423 DAPK3O43293 454 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms