RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 SRPK3Q9UPE1 567 aa3.97□□□□□ -1.77
CHD2-203ENST00000625243 ATP23Q9Y6H3 246 aa3.97□□□□□ -1.77
CHD2-203ENST00000625243 A0A1W2PQU0 124 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 KLRG2A4D1S0 409 aaPredicted RBP3.96□□□□□ -1.78
CHD2-203ENST00000625243 SMAD7O15105 426 aaKnown RBP3.96□□□□□ -1.78
CHD2-203ENST00000625243 MPIG6BO95866 241 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 NR4A1P22736 598 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 GRAMD4Q6IC98 578 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 MRM1Q6IN84 353 aaKnown RBP3.96□□□□□ -1.78
CHD2-203ENST00000625243 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 FAM111BQ6SJ93 734 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 LRRC55Q6ZSA7 311 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 EP400NLQ6ZTU2 488 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 MICALCLQ6ZW33 695 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 IFNL3Q8IZI9 196 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.96□□□□□ -1.78
CHD2-203ENST00000625243 MNTQ99583 582 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 CYP4F11Q9HBI6 524 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 UCKL1Q9NWZ5 548 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 ACTR10Q9NZ32 417 aa3.96□□□□□ -1.78
CHD2-203ENST00000625243 CTDP1Q9Y5B0 961 aaPredicted RBP3.96□□□□□ -1.78
CHD2-203ENST00000625243 SPATA31A6Q5VVP1 1343 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 COL4A3Q01955 1670 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 PRAMEF25A6NGN4 478 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 GOLGA6L6A8MZA4 724 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 PPFIA4O75335 1185 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 RGS19P49795 217 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 ADCY7P51828 1080 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 RABGGTBP53611 331 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 NBPF6Q5VWK0 638 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 HDGFL2Q7Z4V5 671 aaPredicted RBP3.95□□□□□ -1.78
CHD2-203ENST00000625243 ATXN2LQ8WWM7 1075 aaKnown RBP3.95□□□□□ -1.78
CHD2-203ENST00000625243 RPL10LQ96L21 214 aaKnown RBP3.95□□□□□ -1.78
CHD2-203ENST00000625243 NBPF4Q96M43 638 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 ALG1Q9BT22 464 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 RSAD1Q9HA92 442 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.95□□□□□ -1.78
CHD2-203ENST00000625243 HS3ST4Q9Y661 456 aa3.95□□□□□ -1.78
CHD2-203ENST00000625243 UBE2QL1A1L167 161 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 GOLGA8BA8MQT2 603 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 MAN2B1O00754 1011 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 C4BPAP04003 597 aaKnown RBP3.94□□□□□ -1.78
CHD2-203ENST00000625243 ERCC5P28715 1186 aaPredicted RBP3.94□□□□□ -1.78
CHD2-203ENST00000625243 CTGFP29279 349 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 HERVK_113P62684 666 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 ST5P78524 1137 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 TAP1Q03518 808 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 GNL2Q13823 731 aaKnown RBP3.94□□□□□ -1.78
CHD2-203ENST00000625243 GPR19Q15760 415 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 NTRK3Q16288 839 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 SLC10A6Q3KNW5 377 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 TIGD2Q4W5G0 525 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 FBXO42Q6P3S6 717 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 EEPD1Q7L9B9 569 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 PTRH1Q86Y79 214 aaKnown RBP3.94□□□□□ -1.78
CHD2-203ENST00000625243 ELOA2Q8IYF1 753 aaPredicted RBP3.94□□□□□ -1.78
CHD2-203ENST00000625243 EPN3Q9H201 632 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 SLC6A15Q9H2J7 730 aa3.94□□□□□ -1.78
CHD2-203ENST00000625243 BLACEA4D250 179 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 RECKO95980 971 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 KRT15P19012 456 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 FKBP15Q5T1M5 1219 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 STYK1Q6J9G0 422 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 VPS37DQ86XT2 251 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 MB21D1Q8N884 522 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 CPT1CQ8TCG5 803 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 LPPQ93052 612 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 GPHA2Q96T91 129 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 PRDM13Q9H4Q3 707 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 VWA7Q9Y334 891 aa3.93□□□□□ -1.78
CHD2-203ENST00000625243 GRXCR1A8MXD5 290 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 PRODHO43272 600 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 MFAP3LO75121 409 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 AMY2AP04746 511 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 AMY2BP19961 511 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 USP14P54578 494 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 BPIFB4P59827 614 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 FXNQ16595 210 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 PLEKHG4Q58EX7 1191 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 FIGNQ5HY92 759 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 KLHDC10Q6PID8 442 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 HTR3DQ70Z44 454 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 METTL16Q86W50 562 aaKnown RBP3.92□□□□□ -1.78
CHD2-203ENST00000625243 OSTM1Q86WC4 334 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 NT5DC4Q86YG4 428 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 ZC3H7AQ8IWR0 971 aaKnown RBP3.92□□□□□ -1.78
CHD2-203ENST00000625243 ANKRD53Q8N9V6 530 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 GCDHQ92947 438 aaPredicted RBP3.92□□□□□ -1.78
CHD2-203ENST00000625243 SLC7A6OSQ96CW6 309 aaPredicted RBP3.92□□□□□ -1.78
CHD2-203ENST00000625243 TCF25Q9BQ70 676 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 CCSER2Q9H7U1 834 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 IGSF5Q9NSI5 407 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 CATSPERZQ9NTU4 200 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 TESQ9UGI8 421 aaKnown RBP3.92□□□□□ -1.78
CHD2-203ENST00000625243 SORCS3Q9UPU3 1222 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 RBM8AQ9Y5S9 174 aaKnown RBP3.92□□□□□ -1.78
CHD2-203ENST00000625243 MRVI1Q9Y6F6 885 aa3.92□□□□□ -1.78
CHD2-203ENST00000625243 H2AFYO75367 372 aaKnown RBP3.91□□□□□ -1.78
CHD2-203ENST00000625243 MMEP08473 750 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms