RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 KLC3Q6P597 504 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CCDC65Q8IXS2 484 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 RASGRP4Q8TDF6 673 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 NELFBQ8WX92 580 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 LENG1Q96BZ8 264 aaPredicted RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 DHRS1Q96LJ7 313 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 CATSPER2Q96P56 530 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 OLFM3Q96PB7 478 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 BRIP1Q9BX63 1249 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 SPATA16Q9BXB7 569 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 ISCUQ9H1K1 167 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 FAM114A2Q9NRY5 505 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 RBM12Q9NTZ6 932 aaKnown RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 IL1RAPL1Q9NZN1 696 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 NOVA2Q9UNW9 492 aaKnown RBP8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 TFR2Q9UP52 801 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 MYH10P35580 1976 aa8.12□□□□□ -1.11
TRIM49B-202ENST00000622138 STRCQ7RTU9 1775 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 PP2D1A8MPX8 630 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 USP17L12C9JPN9 530 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 USP17L21D6R901 530 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 IPO5O00410 1097 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 BACH1O14867 736 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 WDR46O15213 610 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 GTPBP6O43824 516 aaPredicted RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 DDAH1O94760 285 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 MMEP08473 750 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 FGRP09769 529 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 MYBP10242 640 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 XBP1P17861 261 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 SMARCA1P28370 1054 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 MLH1P40692 756 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 PMS1P54277 932 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 CACNA2D1P54289 1103 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 EIF3BP55884 814 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 MAGOHP61326 146 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 MCL1Q07820 350 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 MAP7Q14244 749 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 KPNB1Q14974 876 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 DIXDC1Q155Q3 683 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 SLC35G1Q2M3R5 365 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 SLC51AQ86UW1 340 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 IRF2BP1Q8IU81 584 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 LRRC15Q8TF66 581 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 SNRNP27Q8WVK2 155 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 ATXN2LQ8WWM7 1075 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 MAGOHBQ96A72 148 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 HIC2Q96JB3 615 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 ZNF333Q96JL9 665 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 NAP1L3Q99457 506 aaPredicted RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 CENPKQ9BS16 269 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 NACA2Q9H009 215 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 SH2D4AQ9H788 454 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 CAPN11Q9UMQ6 739 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 STK38LQ9Y2H1 464 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 LUC7L2Q9Y383 392 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 ROBO1Q9Y6N7 1651 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 COL14A1Q05707 1796 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 KCNJ18B7U540 433 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 NVLO15381 856 aaKnown RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 TJP3O95049 919 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 BMP15O95972 392 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 SCG2P13521 617 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 VHLP40337 213 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 MATR3P43243 847 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 PDE6CP51160 858 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 TNNC1P63316 161 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 PAK1Q13153 545 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 KCNJ12Q14500 433 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 UAP1Q16222 522 aaPredicted RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 ERFEQ4G0M1 354 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 PARP10Q53GL7 1025 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 TCP11X2Q5H9J9 407 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 WASHC2DQ5SRD0 308 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 DAB2IPQ5VWQ8 1189 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 TYW1BQ6NUM6 668 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 SMIM5Q71RC9 77 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 HOOK3Q86VS8 718 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 C4orf32Q8N8J7 132 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 ARL10Q8N8L6 244 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 IFT81Q8WYA0 676 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 LACRTQ9GZZ8 138 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 TBCCD1Q9NVR7 557 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 RWDD2AQ9UIY3 292 aa8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 USP15Q9Y4E8 981 aaPredicted RBP8.11□□□□□ -1.11
TRIM49B-202ENST00000622138 SNX3O60493 162 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 ATP5HO75947 161 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 SUN1O94901 812 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 ASLP04424 464 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 RPN1P04843 607 aaKnown RBP8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 ITGA2BP08514 1039 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 PRCPP42785 496 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 HDAC4P56524 1084 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 GPSM2P81274 684 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 OCRLQ01968 901 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 PPP2R5BQ15173 497 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 NAALADL2Q58DX5 795 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 TBC1D9BQ66K14 1250 aa8.1□□□□□ -1.11
TRIM49B-202ENST00000622138 WDR59Q6PJI9 974 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms