RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CEP128Q6ZU80 1094 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 HDXQ7Z353 690 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 BEST2Q8NFU1 509 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 FAM81BQ96LP2 452 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 SMC6Q96SB8 1091 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 RTFDC1Q9BY42 306 aaPredicted RBP9.98□□□□□ -0.81
GGA3-223ENST00000621870 RAB17Q9H0T7 212 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 THAP9Q9H5L6 903 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 KIAA1586Q9HCI6 787 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 CPA4Q9UI42 421 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 LRRD1A4D1F6 860 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 STK25O00506 426 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 RGL2O15211 777 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 ZNF500O60304 480 aaPredicted RBP9.98□□□□□ -0.81
GGA3-223ENST00000621870 GH1P01241 217 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 NPEPPSP55786 919 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 TNFAIP2Q03169 654 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 KCNH2Q12809 1159 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 SHC4Q6S5L8 630 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 TMEM270Q6UE05 265 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 USP49Q70CQ1 688 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 ERICH1Q86X53 443 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 PALM2Q8IXS6 379 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 SMAP1Q8IYB5 467 aaPredicted RBP9.98□□□□□ -0.81
GGA3-223ENST00000621870 GLT1D1Q96MS3 346 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 TAAR1Q96RJ0 339 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 SMARCAD1Q9H4L7 1026 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 SEL1LQ9UBV2 794 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 DNAJC12Q9UKB3 198 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 PGK2P07205 417 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 SAT1P21673 171 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 ARL4AP40617 200 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 GTF2A2P52657 109 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 TCP11X2Q5H9J9 407 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 PASD1Q8IV76 773 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 FMR1NBQ8N0W7 255 aaPredicted RBP9.98□□□□□ -0.81
GGA3-223ENST00000621870 CCDC110Q8TBZ0 833 aa9.98□□□□□ -0.81
GGA3-223ENST00000621870 MRPL47Q9HD33 250 aaKnown RBP9.98□□□□□ -0.81
GGA3-223ENST00000621870 SUCLA2Q9P2R7 463 aaPredicted RBP9.98□□□□□ -0.81
GGA3-223ENST00000621870 ADM5C9JUS6 153 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 DGAT1O75907 488 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 LGSNQ5TDP6 509 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 PLA2G4FQ68DD2 849 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 RFX6Q8HWS3 928 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 SLC35F6Q8N357 371 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 BBS5Q8N3I7 341 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 ACRBPQ8NEB7 543 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 GOLPH3LQ9H4A5 285 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 KIF9Q9HAQ2 790 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 RBAKQ9NYW8 714 aaPredicted RBP9.97□□□□□ -0.81
GGA3-223ENST00000621870 AGO2Q9UKV8 859 aaKnown RBP9.97□□□□□ -0.81
GGA3-223ENST00000621870 MAGED2Q9UNF1 606 aaPredicted RBP9.97□□□□□ -0.81
GGA3-223ENST00000621870 EYA4O95677 639 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 PRR29P0C7W0 189 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 ALDH3A1P30838 453 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 CXCR5P32302 372 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 ORC2Q13416 577 aaPredicted RBP9.97□□□□□ -0.81
GGA3-223ENST00000621870 MAP7D1Q3KQU3 841 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 POTEAQ6S8J7 498 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 LRRC71Q8N4P6 559 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 GCNAQ96QF7 691 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 KRT12Q99456 494 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 TYW1Q9NV66 732 aaKnown RBP9.97□□□□□ -0.81
GGA3-223ENST00000621870 RSPH14Q9UHP6 348 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 FZD1Q9UP38 647 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 FTCDO95954 541 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 TKFCQ3LXA3 575 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 PPP6R3Q5H9R7 873 aaPredicted RBP9.97□□□□□ -0.81
GGA3-223ENST00000621870 ADGRA1Q86SQ6 560 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 KSR1Q8IVT5 923 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 TRIM11Q96F44 468 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 PHF20Q9BVI0 1012 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 FAM217BQ9NTX9 383 aaPredicted RBP9.97□□□□□ -0.81
GGA3-223ENST00000621870 PTPN22Q9Y2R2 807 aa9.97□□□□□ -0.81
GGA3-223ENST00000621870 STXBP3O00186 592 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 CYP2C9P11712 490 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 RINT1Q6NUQ1 792 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 THEM5Q8N1Q8 247 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 FAM76AQ8TAV0 307 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 CCDC68Q9H2F9 335 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 RABEP2Q9H5N1 569 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 IFT122Q9HBG6 1241 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 PFDN4Q9NQP4 134 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.96□□□□□ -0.81
GGA3-223ENST00000621870 KCNH7Q9NS40 1196 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 ADAM22Q9P0K1 906 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 AK9Q5TCS8 1911 aa9.96□□□□□ -0.81
GGA3-223ENST00000621870 DISP2A7MBM2 1401 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 PRPSAP2O60256 369 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 PRKCBP05771 671 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 ATP5DP30049 168 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 HOXA10P31260 410 aaPredicted RBP9.96□□□□□ -0.82
GGA3-223ENST00000621870 GPC3P51654 580 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 VAMP7P51809 220 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 CASP7P55210 303 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 SNX1Q13596 522 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 PDIA5Q14554 519 aa9.96□□□□□ -0.82
GGA3-223ENST00000621870 GUF1Q8N442 669 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms