RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CELF4Q9BZC1 486 aaKnown RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 DDX24Q9GZR7 859 aaKnown RBP eCLIP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 CHRDQ9H2X0 955 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 TMX1Q9H3N1 280 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 PLEKHA4Q9H4M7 779 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 PRKRIP1Q9H875 184 aaPredicted RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 TRPV5Q9NQA5 729 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 VPS45Q9NRW7 570 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 FAM217BQ9NTX9 383 aaPredicted RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 DKK4Q9UBT3 224 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF215Q9UL58 517 aaPredicted RBP2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SSX2IPQ9Y2D8 614 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 PCDHA2Q9Y5H9 948 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 CDY2AQ9Y6F7 541 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 SLC4A4Q9Y6R1 1079 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 IGF2RP11717 2491 aa2.78□□□□□ -1.96
CPNE3-211ENST00000621526 ZNFX1Q9P2E3 1918 aaKnown RBP2.78□□□□□ -1.97
CPNE3-211ENST00000621526 CACNA1IQ9P0X4 2223 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 MYO10Q9HD67 2058 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 PNMA6EA0A0J9YXQ4 647 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SMIM35A0A1B0GVV1 85 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 MINDY4BA8MYZ0 360 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SPATA31C2B4DYI2 1134 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 PATL2C9JE40 543 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 M0QZ92 97 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 NOP56O00567 594 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 AXIN1O15169 862 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ATXN7O15265 892 aaPredicted RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 AKAP3O75969 853 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 MBD4O95243 580 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SLC3A2P08195 630 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 CT47B1P0C2W7 299 aaPredicted RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 GNAT2P19087 354 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 KCNA4P22459 653 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 KLRC2P26717 231 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 GATMP50440 423 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 CLCN4P51793 760 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SNAP25P60880 206 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 MRPS6P82932 125 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ARHGAP4P98171 946 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 KCNC4Q03721 635 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ZNF252P-AS1Q0IIN9 211 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 PAK2Q13177 524 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 OS9Q13438 667 aaPredicted RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 HNRNPDQ14103 355 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 WTAPQ15007 396 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 LPAL2Q16609 132 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 CCDC96Q2M329 555 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 COL28A1Q2UY09 1125 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SH3PXD2AQ5TCZ1 1133 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 RNF43Q68DV7 783 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 TTBK2Q6IQ55 1244 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 C1orf228Q6PIY5 440 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 METTL7BQ6UX53 244 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 MTSS1LQ765P7 747 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 CACNA2D4Q7Z3S7 1137 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ERC1Q8IUD2 1116 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 FAM160A2Q8N612 972 aaPredicted RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 GIMAP8Q8ND71 665 aaPredicted RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 LMBR1Q8WVP7 490 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 DNAJB3Q8WWF6 145 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SLC39A7Q92504 469 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 TBC1D5Q92609 795 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 TMEM169Q96HH4 297 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 DNAJC2Q99543 621 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ADAM2Q99965 735 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 RPP25Q9BUL9 199 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 PRKD2Q9BZL6 878 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 NT5C3AQ9H0P0 336 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ZBP1Q9H171 429 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ARRDC1-AS1Q9H2J1 176 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ADAMTS10Q9H324 1103 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SLC32A1Q9H598 525 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 CLMPQ9H6B4 373 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 LMAN1LQ9HAT1 526 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 GPCPD1Q9NPB8 672 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 PXMP2Q9NR77 195 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 IL17RBQ9NRM6 502 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 TCP11L1Q9NUJ3 509 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ZDHHC7Q9NXF8 308 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 ERAP1Q9NZ08 941 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 NOB1Q9ULX3 412 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 MRPL11Q9Y3B7 192 aaKnown RBP2.77□□□□□ -1.97
CPNE3-211ENST00000621526 TRPV2Q9Y5S1 764 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 NUMBLQ9Y6R0 609 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 KALRNO60229 2985 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SIP14410 1827 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 PIEZO2Q9H5I5 2752 aa2.77□□□□□ -1.97
CPNE3-211ENST00000621526 SCN5AQ14524 2016 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 HECTD1Q9ULT8 2610 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 CLUHO75153 1309 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ABCB11O95342 1321 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 LAMA5O15230 3695 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 A0A087WV48 116 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 A0A0U1RQF3 1178 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.76□□□□□ -1.97
CPNE3-211ENST00000621526 DENND3A2RUS2 1198 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 FAM205CA6NFA0 338 aa2.76□□□□□ -1.97
CPNE3-211ENST00000621526 SHISA7A6NL88 538 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms