RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 CYP4F22Q6NT55 531 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 DONSONQ9NYP3 566 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 SLC9A2Q9UBY0 812 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 JRKLQ9Y4A0 524 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 AKR1B1P15121 316 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 CDC25BP30305 580 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 ATP1A2P50993 1020 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 GNGT1P63211 74 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 KCNV1Q6PIU1 500 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 PASD1Q8IV76 773 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 MTIF3Q9H2K0 278 aaKnown RBP12.22□□□□□ -0.45
CLIP1-219ENST00000620786 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
CLIP1-219ENST00000620786 IQGAP3Q86VI3 1631 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 A0A087WWV3 80 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 GOLGA8QA0A0J9YX86 632 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 GOLGA8OA6NCC3 632 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 GOLGA8NF8WBI6 632 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 RESTQ13127 1097 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 LDHDQ86WU2 507 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 SDCCAG3Q96C92 435 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 M0QYV0 167 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 NECTIN1Q15223 517 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 TCP11X2Q5H9J9 407 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 SLC10A5Q5PT55 438 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 PRR5LQ6MZQ0 368 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 XXYLT1Q8NBI6 393 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 LXNQ9BS40 222 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 ADORA2BP29275 332 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 HACD3Q9P035 362 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 PCDHA13Q9Y5I0 950 aa12.22□□□□□ -0.45
CLIP1-219ENST00000620786 POTEB3A0JP26 581 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 POTECB2RU33 542 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 KCNA4P22459 653 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 ACCSLQ4AC99 568 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 POTEBQ6S5H4 581 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 RNF10Q8N5U6 811 aaKnown RBP12.21□□□□□ -0.45
CLIP1-219ENST00000620786 N4BP2L2Q92802 583 aaPredicted RBP12.21□□□□□ -0.45
CLIP1-219ENST00000620786 DNAJC12Q9UKB3 198 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 IPO5O00410 1097 aaKnown RBP12.21□□□□□ -0.45
CLIP1-219ENST00000620786 NR3C1P04150 777 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 FOXO4P98177 505 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 ADCY1Q08828 1119 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 VEPH1Q14D04 833 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 RSBN1LQ6PCB5 846 aaPredicted RBP12.21□□□□□ -0.45
CLIP1-219ENST00000620786 TOGARAM2Q6ZUX3 1019 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 EXT2Q93063 718 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 UBE4BO95155 1302 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 CELF2O95319 508 aaKnown RBP12.21□□□□□ -0.45
CLIP1-219ENST00000620786 GCLMP48507 274 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 PLTPP55058 493 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 TMEM270Q6UE05 265 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 DHX38Q92620 1227 aaKnown RBP12.21□□□□□ -0.45
CLIP1-219ENST00000620786 PBKQ96KB5 322 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 PPP1R13BQ96KQ4 1090 aa12.21□□□□□ -0.45
CLIP1-219ENST00000620786 PSMD14O00487 310 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 PAMP19021 973 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 MYRIPQ8NFW9 859 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 LY9Q9HBG7 655 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 SPTLC3Q9NUV7 552 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 ASNSD1Q9NWL6 643 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 ZNF70Q9UC06 446 aaPredicted RBP12.21□□□□□ -0.46
CLIP1-219ENST00000620786 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 STK36Q9NRP7 1315 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 SART1O43290 800 aaKnown RBP12.21□□□□□ -0.46
CLIP1-219ENST00000620786 IL9RQ01113 521 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 C2orf54Q08AI8 447 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 COG2Q14746 738 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 RNF217Q8TC41 542 aa12.21□□□□□ -0.46
CLIP1-219ENST00000620786 FAM217BQ9NTX9 383 aaPredicted RBP12.21□□□□□ -0.46
CLIP1-219ENST00000620786 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.46
CLIP1-219ENST00000620786 FARP1Q9Y4F1 1045 aaPredicted RBP12.21□□□□□ -0.46
CLIP1-219ENST00000620786 CROCC2H7BZ55 1655 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 C1orf167Q5SNV9 1468 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 CREB3O43889 395 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 TTC4O95801 387 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 COASYQ13057 564 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 PCGF5Q86SE9 256 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 FAF2Q96CS3 445 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 FSD1LQ9BXM9 530 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 POLD4Q9HCU8 107 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 PIN4Q9Y237 131 aaKnown RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 GSTA4O15217 222 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 ZBED6P86452 979 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 CC2D1AQ6P1N0 951 aaPredicted RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 RBM46Q8TBY0 533 aaKnown RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 PPP2R3CQ969Q6 453 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 KATNAL1Q9BW62 490 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 SUDS3Q9H7L9 328 aaPredicted RBP12.2□□□□□ -0.46
CLIP1-219ENST00000620786 BARHL2Q9NY43 387 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 ADAM22Q9P0K1 906 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 SPHKAPQ2M3C7 1700 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 POTEIP0CG38 1075 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 DPEP1P16444 411 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 CYP2B6P20813 491 aa12.2□□□□□ -0.46
CLIP1-219ENST00000620786 CXCR5P32302 372 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms