RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 TGM1P22735 817 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 KCNT2Q6UVM3 1135 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 MFSD6Q6ZSS7 791 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 ZNF598Q86UK7 904 aaKnown RBP5.28□□□□□ -1.56
SNCA-213ENST00000618500 THNSL1Q8IYQ7 743 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 KDF1Q8NAX2 398 aaPredicted RBP5.28□□□□□ -1.56
SNCA-213ENST00000618500 STAMQ92783 540 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 ZSCAN10Q96SZ4 725 aaPredicted RBP5.28□□□□□ -1.56
SNCA-213ENST00000618500 TMEM175Q9BSA9 504 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 KAT14Q9H8E8 782 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 ENTPD7Q9NQZ7 604 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 PCDHA1Q9Y5I3 950 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 PNMA6FA0A0J9YX94 578 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 TCF7P36402 384 aaPredicted RBP5.28□□□□□ -1.56
SNCA-213ENST00000618500 MLLT6P55198 1093 aaPredicted RBP5.28□□□□□ -1.56
SNCA-213ENST00000618500 MCMDC2Q4G0Z9 681 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 LAIR1Q6GTX8 287 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 MTHFD1LQ6UB35 978 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 LRRC55Q6ZSA7 311 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 CHST3Q7LGC8 479 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 IQCA1Q86XH1 822 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 RNF168Q8IYW5 571 aaPredicted RBP5.28□□□□□ -1.56
SNCA-213ENST00000618500 TMEM260Q9NX78 707 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 MAD2L2Q9UI95 211 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 ARID2Q68CP9 1835 aa5.28□□□□□ -1.56
SNCA-213ENST00000618500 TBKBP1A7MCY6 615 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 PI15O43692 258 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 MGEA5O60502 916 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 FGAP02671 866 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 PROS1P07225 676 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 KRT76Q01546 638 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 CREMQ03060 361 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 SEC23AQ15436 765 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 VARS2Q5ST30 1063 aaKnown RBP5.27□□□□□ -1.57
SNCA-213ENST00000618500 PLPP4Q5VZY2 271 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 CCDC149Q6ZUS6 474 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 KIAA2013Q8IYS2 634 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 DNAJB3Q8WWF6 145 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 MSANTD3Q96H12 275 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 KRT23Q9C075 422 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 TBC1D17Q9HA65 648 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 WDR6Q9NNW5 1121 aaKnown RBP5.27□□□□□ -1.57
SNCA-213ENST00000618500 CHST12Q9NRB3 414 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 CDV3Q9UKY7 258 aaKnown RBP5.27□□□□□ -1.57
SNCA-213ENST00000618500 CLUHO75153 1309 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 NEDD4P46934 1319 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 KRBA1A5PL33 1030 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 CLCN4P51793 760 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 PLCB4Q15147 1175 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 LETM2Q2VYF4 491 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 CYFIP1Q7L576 1253 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 TBC1D10CQ8IV04 446 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 PCYT2Q99447 389 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 LZTS2Q9BRK4 669 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 SPZ1Q9BXG8 430 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 KCNK12Q9HB15 430 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 RXFP1Q9HBX9 757 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 JADE2Q9NQC1 790 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 TYW1Q9NV66 732 aaKnown RBP5.27□□□□□ -1.57
SNCA-213ENST00000618500 ZDHHC7Q9NXF8 308 aa5.27□□□□□ -1.57
SNCA-213ENST00000618500 DBR1Q9UK59 544 aaKnown RBP5.27□□□□□ -1.57
SNCA-213ENST00000618500 HIDE1A8MVS5 230 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 HBP1O60381 514 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 CFBP00751 764 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 MYCLP12524 364 aaPredicted RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 CNR2P34972 360 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 NRLP54845 237 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 CDC42EP1Q00587 391 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 MMRN1Q13201 1228 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 PPP1R18Q6NYC8 613 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 RBM23Q86U06 439 aaKnown RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 ECHDC2Q86YB7 292 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 SIX5Q8N196 739 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 ENAHQ8N8S7 591 aaPredicted RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 GPKOWQ92917 476 aaPredicted RBP eCLIP5.26□□□□□ -1.57
SNCA-213ENST00000618500 SEC62Q99442 399 aaKnown RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 DSCC1Q9BVC3 393 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 EMILIN2Q9BXX0 1053 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 AVENQ9NQS1 362 aaPredicted RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 RXFP3Q9NSD7 469 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 MYO9BQ13459 2157 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 NUP210Q8TEM1 1887 aaPredicted RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 CNTNAP2Q9UHC6 1331 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 SOBPA7XYQ1 873 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 PER2O15055 1255 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 GPR32O75388 356 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 HOXA6P31267 233 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 HOXA9P31269 272 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 HTR4Q13639 388 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 RASEFQ8IZ41 740 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 MBOAT7Q96N66 472 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 NELL2Q99435 816 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 ARHGEF3Q9NR81 526 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 SMG5Q9UPR3 1016 aaKnown RBP5.26□□□□□ -1.57
SNCA-213ENST00000618500 STK24Q9Y6E0 443 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 COL4A3Q01955 1670 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 PYGBP11216 843 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 INSRRP14616 1297 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 RAB27AP51159 221 aa5.26□□□□□ -1.57
SNCA-213ENST00000618500 CHMP4BP1P59074 171 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms