RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 EML1O00423 815 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 ATP2B1P20020 1258 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 LPIN1Q14693 890 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 CALCRLQ16602 461 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 FBXO47Q5MNV8 452 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 IER5Q5VY09 327 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 NCAPH2Q6IBW4 605 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 FAM117BQ6P1L5 589 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 SLFN12Q8IYM2 578 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 APBB2Q92870 758 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 KIF3AQ9Y496 699 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 ARIH1Q9Y4X5 557 aaPredicted RBP17.97■□□□□ 0.47
BRCA1-228ENST00000618469 EVPLQ92817 2033 aa17.97■□□□□ 0.47
BRCA1-228ENST00000618469 BAG4O95429 457 aaKnown RBP17.96■□□□□ 0.47
BRCA1-228ENST00000618469 MKRN4PQ13434 485 aaPredicted RBP17.96■□□□□ 0.47
BRCA1-228ENST00000618469 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.96■□□□□ 0.47
BRCA1-228ENST00000618469 TSHZ1Q6ZSZ6 1077 aa17.96■□□□□ 0.47
BRCA1-228ENST00000618469 MYOCDQ8IZQ8 938 aa17.96■□□□□ 0.47
BRCA1-228ENST00000618469 METTL13Q8N6R0 699 aa17.96■□□□□ 0.47
BRCA1-228ENST00000618469 PPP1R16BQ96T49 567 aa17.96■□□□□ 0.47
BRCA1-228ENST00000618469 FOXP1Q9H334 677 aaPredicted RBP17.96■□□□□ 0.47
BRCA1-228ENST00000618469 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
BRCA1-228ENST00000618469 GINS2Q9Y248 185 aa17.96■□□□□ 0.47
BRCA1-228ENST00000618469 ARID2Q68CP9 1835 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 TMEM150BA6NC51 233 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 AMHP03971 560 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 IL9P15248 144 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 KCNA5P22460 613 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 SSTR3P32745 418 aaPredicted RBP17.95■□□□□ 0.46
BRCA1-228ENST00000618469 CLCN3P51790 818 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 MTERF2Q49AM1 385 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 NOSTRINQ8IVI9 506 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 LRRC71Q8N4P6 559 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 UBE2ZQ9H832 354 aaPredicted RBP17.95■□□□□ 0.46
BRCA1-228ENST00000618469 SUGCTQ9HAC7 445 aa17.95■□□□□ 0.46
BRCA1-228ENST00000618469 MCM7P33993 719 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 PSMC5P62195 406 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 SPIRE1Q08AE8 756 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 TBC1D8BQ0IIM8 1120 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 XKR3Q5GH77 459 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 KIAA0319LQ8IZA0 1049 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 NME8Q8N427 588 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 MAP7D2Q96T17 732 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 LXNQ9BS40 222 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 CELF4Q9BZC1 486 aaKnown RBP17.94■□□□□ 0.46
BRCA1-228ENST00000618469 KDM3AQ9Y4C1 1321 aa17.94■□□□□ 0.46
BRCA1-228ENST00000618469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.93■□□□□ 0.46
BRCA1-228ENST00000618469 MAGEB2O15479 319 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 GJB5O95377 273 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 VTNP04004 478 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 GJB2P29033 226 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 CD52P31358 61 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 QARSP47897 775 aaKnown RBP17.93■□□□□ 0.46
BRCA1-228ENST00000618469 CYP4A11Q02928 519 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 PAK2Q13177 524 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 PLA2G4FQ68DD2 849 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 EFCAB12Q6NXP0 572 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 GJD3Q8N144 294 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.93■□□□□ 0.46
BRCA1-228ENST00000618469 SH2D3AQ9BRG2 576 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 TMEM60Q9H2L4 133 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 TTC12Q9H892 705 aaPredicted RBP17.93■□□□□ 0.46
BRCA1-228ENST00000618469 AGO3Q9H9G7 860 aaKnown RBP17.93■□□□□ 0.46
BRCA1-228ENST00000618469 NOL7Q9UMY1 257 aaKnown RBP17.93■□□□□ 0.46
BRCA1-228ENST00000618469 AKT3Q9Y243 479 aa17.93■□□□□ 0.46
BRCA1-228ENST00000618469 DKC1O60832 514 aaKnown RBP eCLIP17.92■□□□□ 0.46
BRCA1-228ENST00000618469 STBD1O95210 358 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 P4HBP07237 508 aaKnown RBP17.92■□□□□ 0.46
BRCA1-228ENST00000618469 TMOD1P28289 359 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 TXKP42681 527 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 EPHA7Q15375 998 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 KIZQ2M2Z5 673 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 TTC38Q5R3I4 469 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 FAM178BQ8IXR5 827 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 LINC01465Q8N7H1 131 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 DYDC2Q96IM9 177 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 OSMRQ99650 979 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 WRAP73Q9P2S5 460 aaPredicted RBP17.92■□□□□ 0.46
BRCA1-228ENST00000618469 PCDHA12Q9UN75 941 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 SMC3Q9UQE7 1217 aa17.92■□□□□ 0.46
BRCA1-228ENST00000618469 POTEMA6NI47 508 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 DDX11L8A8MPP1 907 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 MRE11P49959 708 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 CTTNQ14247 550 aaKnown RBP17.91■□□□□ 0.46
BRCA1-228ENST00000618469 TARBP2Q15633 366 aaKnown RBP17.91■□□□□ 0.46
BRCA1-228ENST00000618469 TMEM266Q2M3C6 531 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 MCTP1Q6DN14 999 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 ANO5Q75V66 913 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 MTMR9Q96QG7 549 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 NIFKQ9BYG3 293 aaKnown RBP17.91■□□□□ 0.46
BRCA1-228ENST00000618469 RGL1Q9NZL6 768 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.91■□□□□ 0.46
BRCA1-228ENST00000618469 SQORQ9Y6N5 450 aa17.91■□□□□ 0.46
BRCA1-228ENST00000618469 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.9■□□□□ 0.46
BRCA1-228ENST00000618469 LINC01553A4QN01 128 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 H3BQV1 296 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 UPP2O95045 317 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 OR52Z1P0C646 297 aa17.9■□□□□ 0.46
BRCA1-228ENST00000618469 U2AF2P26368 475 aaKnown RBP eCLIP17.9■□□□□ 0.46
BRCA1-228ENST00000618469 TRAPPC10P48553 1259 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms