RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 CHD8Q9HCK8 2581 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 DENND3A2RUS2 1198 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 TBKBP1A7MCY6 615 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 C9IYK1 514 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 MEIS1O00470 390 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 SLC27A2O14975 620 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 GPR182O15218 404 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 MGEA5O60502 916 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 RPS6KA5O75582 802 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 FGF18O76093 207 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 ARP10275 920 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 LAG3P18627 525 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 KLRC1P26715 233 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 SREBF1P36956 1147 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 ADCY7P51828 1080 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 NAPAP54920 295 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 DUSP6Q16828 381 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 TMEM266Q2M3C6 531 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 ZNF484Q5JVG2 852 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 SYNE3Q6ZMZ3 975 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 SLC24A5Q71RS6 500 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 RBM23Q86U06 439 aaKnown RBP13.67□□□□□ -0.22
COL4A2-210ENST00000617564 CYP2W1Q8TAV3 490 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 SUSD6Q92537 303 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 ADAM2Q99965 735 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
COL4A2-210ENST00000617564 ELAC1Q9H777 363 aaKnown RBP13.67□□□□□ -0.22
COL4A2-210ENST00000617564 LZTS1Q9Y250 596 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 NOC2LQ9Y3T9 749 aaKnown RBP13.67□□□□□ -0.22
COL4A2-210ENST00000617564 PLXNA4Q9HCM2 1894 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 ACACBO00763 2458 aa13.67□□□□□ -0.22
COL4A2-210ENST00000617564 BACH1O14867 736 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 FSCN2O14926 492 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 CREB3L3Q68CJ9 461 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 TYW1BQ6NUM6 668 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 TMEM184AQ6ZMB5 413 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 RAB11FIP4Q86YS3 637 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 THNSL1Q8IYQ7 743 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 KIAA0319LQ8IZA0 1049 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 CCDC82Q8N4S0 544 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 COLGALT1Q8NBJ5 622 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 KCNG4Q8TDN1 519 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 MICAL1Q8TDZ2 1067 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 TMEM161AQ9NX61 479 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 DLL3Q9NYJ7 618 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 GINS2Q9Y248 185 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 PCDHGC5Q9Y5F6 944 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 LOXHD1Q8IVV2 1947 aa13.66□□□□□ -0.22
COL4A2-210ENST00000617564 FNDC1Q4ZHG4 1894 aaPredicted RBP13.65□□□□□ -0.22
COL4A2-210ENST00000617564 HOXA2O43364 376 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 CCNE2O96020 404 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 CLK2P49760 499 aaKnown RBP13.65□□□□□ -0.22
COL4A2-210ENST00000617564 CRYBB1P53674 252 aaPredicted RBP13.65□□□□□ -0.22
COL4A2-210ENST00000617564 PLCB3Q01970 1234 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 ACAP1Q15027 740 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 MIS18BP1Q6P0N0 1132 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 PDXDC2PQ6P474 469 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 APOA5Q6Q788 366 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 CCDC60Q8IWA6 550 aaPredicted RBP13.65□□□□□ -0.22
COL4A2-210ENST00000617564 TMEM40Q8WWA1 233 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 PGBD1Q96JS3 809 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 CWH43Q9H720 699 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 ATP6V0A4Q9HBG4 840 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 ZNF302Q9NR11 478 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
COL4A2-210ENST00000617564 RALYQ9UKM9 306 aaKnown RBP13.65□□□□□ -0.22
COL4A2-210ENST00000617564 ST3GAL5Q9UNP4 418 aa13.65□□□□□ -0.22
COL4A2-210ENST00000617564 PER2O15055 1255 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 PPFIA3O75145 1194 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 C22orf31O95567 290 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 IBSPP21815 317 aaPredicted RBP13.64□□□□□ -0.23
COL4A2-210ENST00000617564 PPM1AP35813 382 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 ZNF76P36508 570 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 ERVFC1P60507 584 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 FAM189BP81408 668 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 FUT2Q10981 343 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 KCNC3Q14003 757 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 COL9A3Q14050 684 aaPredicted RBP13.64□□□□□ -0.23
COL4A2-210ENST00000617564 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 RTN1Q16799 776 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 ZNF710Q8N1W2 664 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 VN1R2Q8NFZ6 395 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
COL4A2-210ENST00000617564 MRPS27Q92552 414 aaKnown RBP13.64□□□□□ -0.23
COL4A2-210ENST00000617564 ESYT1Q9BSJ8 1104 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 LRRC2Q9BYS8 371 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 TMEM117Q9H0C3 514 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 CDHR5Q9HBB8 845 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 TMEM260Q9NX78 707 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 BARHL2Q9NY43 387 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 PUF60Q9UHX1 559 aaKnown RBP13.64□□□□□ -0.23
COL4A2-210ENST00000617564 ATRXP46100 2492 aa13.64□□□□□ -0.23
COL4A2-210ENST00000617564 SMCO2A6NFE2 343 aa13.63□□□□□ -0.23
COL4A2-210ENST00000617564 ZBTB42B2RXF5 422 aa13.63□□□□□ -0.23
COL4A2-210ENST00000617564 DDX39AO00148 427 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms