RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SPARCL1Q14515 664 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 SMCR8Q8TEV9 937 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-211ENST00000615798 NSFP46459 744 aaKnown RBP9.9□□□□□ -0.82
COL12A1-211ENST00000615798 CLK1P49759 484 aaKnown RBP9.9□□□□□ -0.82
COL12A1-211ENST00000615798 RBM5P52756 815 aaKnown RBP eCLIP9.9□□□□□ -0.82
COL12A1-211ENST00000615798 RSBN1Q5VWQ0 802 aaPredicted RBP9.9□□□□□ -0.82
COL12A1-211ENST00000615798 FRA10AC1Q70Z53 315 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 C19orf18Q8NEA5 215 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 CSRNP1Q96S65 589 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 ALKQ9UM73 1620 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 TOM1L1O75674 476 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 GOLGA8HP0CJ92 632 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 AKAP5P24588 427 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 ACAD11Q709F0 780 aa9.9□□□□□ -0.82
COL12A1-211ENST00000615798 CCDC59Q9P031 241 aaKnown RBP9.9□□□□□ -0.82
COL12A1-211ENST00000615798 YWHABP31946 246 aaKnown RBP9.9□□□□□ -0.83
COL12A1-211ENST00000615798 OCLNQ16625 522 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 PBXIP1Q96AQ6 731 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 CABP5Q9NP86 173 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 NUTM2BA6NNL0 878 aaPredicted RBP9.9□□□□□ -0.83
COL12A1-211ENST00000615798 A8MXQ7 604 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 NUTM2EB1AL46 878 aaPredicted RBP9.9□□□□□ -0.83
COL12A1-211ENST00000615798 EIF3HO15372 352 aaKnown RBP eCLIP9.9□□□□□ -0.83
COL12A1-211ENST00000615798 PSMC3P17980 439 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 PSMA3P25788 255 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 NUP107P57740 925 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 ADCY2Q08462 1091 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 GPR141Q7Z602 305 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 CNPY3Q9BT09 278 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 HAUS4Q9H6D7 363 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 ZNF212Q9UDV6 495 aa9.9□□□□□ -0.83
COL12A1-211ENST00000615798 ETF1P62495 437 aaKnown RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 PAK1Q13153 545 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ME3Q16798 604 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 KRT25Q7Z3Z0 450 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 LRRC8AQ8IWT6 810 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 GDAP1Q8TB36 358 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 USP31Q70CQ4 1352 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 SEMA3EO15041 775 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 PNMA6AP0CW24 399 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 PDE6CP51160 858 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 NR1H3Q13133 447 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 FGD2Q7Z6J4 655 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 FAM192AQ9GZU8 254 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 CDC27P30260 824 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 C16orf72Q14CZ0 275 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 G2E3Q7L622 706 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 FAM129BQ96TA1 746 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 BPIFA3Q9BQP9 254 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 KCNK3O14649 394 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ST5P78524 1137 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 MKRN3Q13064 507 aaKnown RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 INPP5AQ14642 412 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ACAP2Q15057 778 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 CCDC157Q569K6 752 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 BBS2Q9BXC9 721 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ATXN3P54252 364 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 POLA2Q14181 598 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 KBTBD12Q3ZCT8 623 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 CENPUQ71F23 418 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 NT5C3AQ9H0P0 336 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ADNPQ9H2P0 1102 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 PNMA2Q9UL42 364 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ZMYM6O95789 1325 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ECEL1O95672 775 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 MARCKSP29966 332 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 TPTE2Q6XPS3 522 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 PA2G4Q9UQ80 394 aaKnown RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 SCP2P22307 547 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 GUCY2DQ02846 1103 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 SV2BQ7L1I2 683 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 APOL4Q9BPW4 351 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 EPS8L2Q9H6S3 715 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ARPP21Q9UBL0 812 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 POLR2DO15514 142 aaKnown RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 GPAA1O43292 621 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 CHEK2O96017 543 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 IMPDH2P12268 514 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ITGAXP20702 1163 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 PHKA1P46020 1223 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 HIPK4Q8NE63 616 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 ARHGEF40Q8TER5 1519 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 IRS4O14654 1257 aaPredicted RBP9.89□□□□□ -0.83
COL12A1-211ENST00000615798 CDC37L1Q7L3B6 337 aa9.89□□□□□ -0.83
COL12A1-211ENST00000615798 AHCYL1O43865 530 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 PAPOLAP51003 745 aaKnown RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 TTC6Q86TZ1 520 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 GPT2Q8TD30 523 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 OTUD7AQ8TE49 926 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 EXOC7Q9UPT5 735 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 WDR91A4D1P6 747 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 E7EWF7 191 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 PDZD4Q76G19 769 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 ZSCAN29Q8IWY8 852 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 PROCA1Q8NCQ7 364 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 RNF14Q9UBS8 474 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 CDC37Q16543 378 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 BSPRYQ5W0U4 402 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 SUN5Q8TC36 379 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms