RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GORASP1Q9BQQ3 440 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 KLHL4Q9C0H6 718 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 NLRC4Q9NPP4 1024 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 ZNF212Q9UDV6 495 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 LRRIQ1Q96JM4 1722 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 TNFAIP8O95379 198 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 MYBL1P10243 752 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 PROSER2Q86WR7 435 aaPredicted RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 WDR60Q8WVS4 1066 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.35□□□□□ -0.917e-7■■■■■ 60.2
TTC28-208ENST00000612946 VPS39Q96JC1 886 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 ANP32DO95626 131 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 CHPF2Q9P2E5 772 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 ARHGEF11O15085 1522 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 ATP10DQ9P241 1426 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 KLHL41O60662 606 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 TRIM49P0CI25 452 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 TRIM49CP0CI26 452 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 GPTP24298 496 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 EIF4A3P38919 411 aaKnown RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 CDH24Q86UP0 819 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 RMDN1Q96DB5 314 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 FAM212AQ96EL1 285 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 MPP4Q96JB8 637 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 CDV3Q9UKY7 258 aaKnown RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 SLC4A7Q9Y6M7 1214 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 CAPN9O14815 690 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 ELOA2Q8IYF1 753 aaPredicted RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 CEP95Q96GE4 821 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 C1orf50Q9BV19 199 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 UVRAGQ9P2Y5 699 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 WBP4O75554 376 aaKnown RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 POLD1P28340 1107 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 GSTA3Q16772 222 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 RBBP8NLQ8NC74 664 aaPredicted RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 GCNT4Q9P109 453 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 UBA2Q9UBT2 640 aaPredicted RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 POTEFA5A3E0 1075 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 POTEIP0CG38 1075 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 PMS1P54277 932 aaKnown RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 TBC1D9BQ66K14 1250 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 APOA5Q6Q788 366 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 POTEEQ6S8J3 1075 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 RPAP3Q9H6T3 665 aaPredicted RBP9.35□□□□□ -0.91
TTC28-208ENST00000612946 CHMP2BQ9UQN3 213 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 EVPLLA8MZ36 301 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 ABCB4P21439 1286 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 FLCNQ8NFG4 579 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 WNT8AQ9H1J5 351 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 PTPN22Q9Y2R2 807 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 PCDHA5Q9Y5H7 936 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 ZMYND10O75800 440 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 MMGT1Q8N4V1 131 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 AZI2Q9H6S1 392 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 COPG2Q9UBF2 871 aa9.35□□□□□ -0.91
TTC28-208ENST00000612946 E7EWF7 191 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 VWA5AO00534 786 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 DLGAP3O95886 979 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 DAB2P98082 770 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 MYL7Q01449 175 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 OCRLQ01968 901 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 LRRC8EQ6NSJ5 796 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 RNF26Q9BY78 433 aaPredicted RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 SMYD3Q9H7B4 428 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 TNKSO95271 1327 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 PTCH1Q13635 1447 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 KANSL1LA0AUZ9 987 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 LCA5LO95447 670 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 ADGRL2O95490 1459 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 PAMP19021 973 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 MAPK4P31152 587 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 PTK2Q05397 1052 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 PTK2BQ14289 1009 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 KRT31Q15323 416 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 TNNI3KQ59H18 835 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 FAM178BQ8IXR5 827 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 MCRS1Q96EZ8 462 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 SNX25Q9H3E2 840 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 CARD8Q9Y2G2 431 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 FPGT-TNNI3KV9GXZ4 949 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 PDE6AP16499 860 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 CYP4F22Q6NT55 531 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 NSL1Q96IY1 281 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 ZHX2Q9Y6X8 837 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 PCDH11YQ9BZA8 1340 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 GUCY1B2O75343 617 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 POLR2FP61218 127 aaKnown RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 KIAA0825Q8IV33 1275 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 SEPT1Q8WYJ6 367 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 MEIS1O00470 390 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 SASH1O94885 1247 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 APOA4P06727 396 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 KBTBD12Q3ZCT8 623 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 LINC00301Q8NCQ3 95 aa9.34□□□□□ -0.91
TTC28-208ENST00000612946 POP5Q969H6 163 aaKnown RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 LRRC59Q96AG4 307 aaKnown RBP9.34□□□□□ -0.91
TTC28-208ENST00000612946 NR1H4Q96RI1 486 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms