RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 MTMR1Q13613 665 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 PPP2R5AQ15172 486 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 ZC2HC1CQ53FD0 456 aaPredicted RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 B4GALNT4Q76KP1 1039 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 RUSC1Q9BVN2 902 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 OLFML3Q9NRN5 406 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 FAM114A2Q9NRY5 505 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 TMOD4Q9NZQ9 345 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 ZNF70Q9UC06 446 aaPredicted RBP6.92□□□□□ -1.3
SNX13-213ENST00000611725 MYO1FO00160 1098 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 PEX3P56589 373 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 ITIH3Q06033 890 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 NAB2Q15742 525 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 RINT1Q6NUQ1 792 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 BANK1Q8NDB2 785 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 DEPTORQ8TB45 409 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 POMGNT1Q8WZA1 660 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 MRIQ9BWK5 157 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 GOLPH3Q9H4A6 298 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 KCNQ5Q9NR82 932 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 ODF2LQ9ULJ1 636 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 TMX2Q9Y320 296 aa6.92□□□□□ -1.3
SNX13-213ENST00000611725 RSPH10B2B2RC85 870 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 H3BQF6 201 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 ATP2C2O75185 946 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 RSPH10BP0C881 870 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 GALCP54803 685 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 PLTPP55058 493 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 TTLL12Q14166 644 aaPredicted RBP6.91□□□□□ -1.3
SNX13-213ENST00000611725 MAGOHBQ96A72 148 aaKnown RBP6.91□□□□□ -1.3
SNX13-213ENST00000611725 CDHR1Q96JP9 859 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 KCNMB3Q9NPA1 279 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 KCND2Q9NZV8 630 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 FEM1BQ9UK73 627 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 ZNRF3Q9ULT6 936 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 GOLGA8IPA6NC78 632 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 RCCD1A6NED2 376 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 GOLGA8JA6NMD2 632 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 FMO5P49326 533 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 CASP4P49662 377 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 LIG4P49917 911 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 PDE6CP51160 858 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 CUL1Q13616 776 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 RASA3Q14644 834 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 LIN9Q5TKA1 542 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 AS3MTQ9HBK9 375 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.91□□□□□ -1.3
SNX13-213ENST00000611725 M0R2N6 131 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 ATP2A1O14983 1001 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 NEFHP12036 1026 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 CD19P15391 556 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 CCT5P48643 541 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 COBLL1Q53SF7 1204 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 FOXR2Q6PJQ5 311 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 HOOK3Q86VS8 718 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 ZNF653Q96CK0 615 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 SELENOSQ9BQE4 189 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 INTS2Q9H0H0 1204 aaKnown RBP6.91□□□□□ -1.3
SNX13-213ENST00000611725 RNF146Q9NTX7 359 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 GRID2IPA4D2P6 1211 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 SPDYE2BA6NHP3 402 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 MYO1CO00159 1063 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
SNX13-213ENST00000611725 SPDYE6P0CI01 402 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 INPP5BP32019 993 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 LLGL1Q15334 1064 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 ANKRD35Q8N283 1001 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 GMCL1P1Q8NEA9 526 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNX13-213ENST00000611725 GLG1Q92896 1179 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 FAM198AQ9UFP1 575 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 MEIS2O14770 477 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 FANCGO15287 622 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 HIP1RO75146 1068 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 CIITAP33076 1130 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 BPIFB4P59827 614 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 PDCLQ13371 301 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 STYK1Q6J9G0 422 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 RNF207Q6ZRF8 634 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 CCDC121Q6ZUS5 278 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 MPHOSPH6Q99547 160 aaKnown RBP6.91□□□□□ -1.3
SNX13-213ENST00000611725 SYNCQ9H7C4 482 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 RAVER2Q9HCJ3 691 aaKnown RBP6.91□□□□□ -1.3
SNX13-213ENST00000611725 KCNH7Q9NS40 1196 aa6.91□□□□□ -1.3
SNX13-213ENST00000611725 LRRIQ3A6PVS8 624 aaPredicted RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 SLC16A4O15374 487 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 PPP1R11O60927 126 aaPredicted RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 PSMC5P62195 406 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 EZH2Q15910 746 aaKnown RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 MCPH1Q8NEM0 835 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 FAM212AQ96EL1 285 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.33e-6■■■■■ 30.2
SNX13-213ENST00000611725 TMEM39BQ9GZU3 492 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 AZI2Q9H6S1 392 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 KMT5AQ9NQR1 393 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 RRP15Q9Y3B9 282 aaKnown RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 EVI5O60447 810 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 NPM3O75607 178 aaKnown RBP6.9□□□□□ -1.3
SNX13-213ENST00000611725 RFX1P22670 979 aa6.9□□□□□ -1.3
SNX13-213ENST00000611725 SOX5P35711 763 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms