RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 WDR66Q8TBY9 1149 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 ZNF384Q8TF68 577 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 ELAC2Q9BQ52 826 aaKnown RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.97□□□□□ -0.334e-8■■□□□ 12
TP53-220ENST00000610623 TMEM121BQ9BXQ6 578 aaPredicted RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 RAB17Q9H0T7 212 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 SEMA6BQ9H3T3 888 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 PNMA2Q9UL42 364 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 PACSIN2Q9UNF0 486 aaPredicted RBP12.97□□□□□ -0.33
TP53-220ENST00000610623 IVNS1ABPQ9Y6Y0 642 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 BRWD3Q6RI45 1802 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 CNTNAP5Q8WYK1 1306 aa12.97□□□□□ -0.33
TP53-220ENST00000610623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.96□□□□□ -0.33
TP53-220ENST00000610623 CCDC169A6NNP5 214 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 NKRFO15226 690 aaKnown RBP eCLIP12.96□□□□□ -0.33
TP53-220ENST00000610623 WFS1O76024 890 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 RTN3O95197 1032 aaPredicted RBP12.96□□□□□ -0.33
TP53-220ENST00000610623 RFC5P40937 340 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 PDE6CP51160 858 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 LACTBP83111 547 aaPredicted RBP12.96□□□□□ -0.33
TP53-220ENST00000610623 ATP11AP98196 1134 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 C10orf76Q5T2E6 689 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 CWF19L1Q69YN2 538 aaKnown RBP12.96□□□□□ -0.33
TP53-220ENST00000610623 CCDC24Q8N4L8 307 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
TP53-220ENST00000610623 NAF1Q96HR8 494 aaKnown RBP12.96□□□□□ -0.33
TP53-220ENST00000610623 TSC22D3Q99576 134 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 ARHGEF3Q9NR81 526 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 PAPOLBQ9NRJ5 636 aaKnown RBP12.96□□□□□ -0.33
TP53-220ENST00000610623 LRRC4BQ9NT99 713 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 ANKIB1Q9P2G1 1089 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 UTP11Q9Y3A2 253 aaKnown RBP12.96□□□□□ -0.33
TP53-220ENST00000610623 ATP6V0A2Q9Y487 856 aa12.96□□□□□ -0.33
TP53-220ENST00000610623 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.96□□□□□ -0.34
TP53-220ENST00000610623 DAPK3O43293 454 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 CEP104O60308 925 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 CAND2O75155 1236 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 UBOX5O94941 541 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 HOXA7P31268 230 aaPredicted RBP12.96□□□□□ -0.34
TP53-220ENST00000610623 COPS2P61201 443 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 BNIP1Q12981 228 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 SBK1Q52WX2 424 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 PRR5LQ6MZQ0 368 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 ZNF804AQ7Z570 1209 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 ZFAND2BQ8WV99 257 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 KLHL29Q96CT2 875 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 AK8Q96MA6 479 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 PLCD4Q9BRC7 762 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 TXLNGYQ9BZA5 131 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.34
TP53-220ENST00000610623 ECT2Q9H8V3 914 aa12.96□□□□□ -0.34
TP53-220ENST00000610623 INTS9Q9NV88 658 aaKnown RBP12.96□□□□□ -0.34
TP53-220ENST00000610623 ARPP21Q9UBL0 812 aaPredicted RBP12.96□□□□□ -0.34
TP53-220ENST00000610623 IGF2BP3O00425 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
TP53-220ENST00000610623 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 SNX3O60493 162 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 ABL2P42684 1182 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 MSH2P43246 934 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 ASIC1P78348 528 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 GSTO1P78417 241 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 PFKFB3Q16875 520 aaPredicted RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 FAM43BQ6ZT52 329 aaPredicted RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 ERICH1Q86X53 443 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 OSBPL1AQ9BXW6 950 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 ABCF3Q9NUQ8 709 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.95□□□□□ -0.34
TP53-220ENST00000610623 KRIT1O00522 736 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 VIMP08670 466 aaKnown RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 FCER1AP12319 257 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 CDC25CP30307 473 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 GCLCP48506 637 aaPredicted RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 CTCFP49711 727 aaPredicted RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 TAF11Q15544 211 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 CRY2Q49AN0 593 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 CMPK2Q5EBM0 449 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 FOXR2Q6PJQ5 311 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 DZIP1Q86YF9 867 aaKnown RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 BLIDQ8IZY5 108 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 TBC1D5Q92609 795 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 PBXIP1Q96AQ6 731 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 RBM17Q96I25 401 aaKnown RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 FMO2Q99518 471 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 SELENOSQ9BQE4 189 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 DDX47Q9H0S4 455 aaKnown RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 ADAM7Q9H2U9 754 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
TP53-220ENST00000610623 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.95□□□□□ -0.34
TP53-220ENST00000610623 LRRC42Q9Y546 428 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 LRRC37AA6NMS7 1700 aa12.95□□□□□ -0.34
TP53-220ENST00000610623 PP2D1A8MPX8 630 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 E7ENQ6 273 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 TLR2O60603 784 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 OAS1P00973 400 aaKnown RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 AGTP01019 485 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 GYS1P13807 737 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 CLK2P49760 499 aaKnown RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 MRPS35P82673 323 aaKnown RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 FAM83BQ5T0W9 1011 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 RASGEF1CQ8N431 466 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms