RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 CRACR2AQ9BSW2 395 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ST6GALNAC4Q9H4F1 302 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 NLRC4Q9NPP4 1024 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 HOMER2Q9NSB8 354 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 RNF146Q9NTX7 359 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ANKEF1Q9NU02 776 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 FAM53CQ9NYF3 392 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 GPRC5DQ9NZD1 345 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 SCAF8Q9UPN6 1271 aaKnown RBP13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ZHX2Q9Y6X8 837 aa13.1□□□□□ -0.31
USP6NL-206ENST00000609853 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
USP6NL-206ENST00000609853 COL11A1P12107 1806 aaPredicted RBP13.09□□□□□ -0.31
USP6NL-206ENST00000609853 SFI1A8K8P3 1242 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 ZBTB39O15060 712 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 HIP1RO75146 1068 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 UCHL3P15374 230 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
USP6NL-206ENST00000609853 PON1P27169 355 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 PSMC5P62195 406 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 MAPK7Q13164 816 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 SLC18A3Q16572 532 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 ZNF746Q6NUN9 644 aaPredicted RBP13.09□□□□□ -0.31
USP6NL-206ENST00000609853 VSIG10LQ86VR7 867 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 KRT222Q8N1A0 295 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 REPS2Q8NFH8 660 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
USP6NL-206ENST00000609853 ATG4CQ96DT6 458 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 CDHR1Q96JP9 859 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 DRC1Q96MC2 740 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 PARD6BQ9BYG5 372 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 ARFGAP3Q9NP61 516 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 SAMM50Q9Y512 469 aa13.09□□□□□ -0.31
USP6NL-206ENST00000609853 MYH10P35580 1976 aa13.08□□□□□ -0.31
USP6NL-206ENST00000609853 MACROD2A1Z1Q3 448 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 TLR2O60603 784 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ZRANB2O95218 330 aaKnown RBP eCLIP13.08□□□□□ -0.321e-6■■■■■ 42
USP6NL-206ENST00000609853 MCM3P25205 808 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 PRKCIP41743 596 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 RARRES1P49788 294 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 KLHL30Q0D2K2 578 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 RAPGEF1Q13905 1077 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 TCERG1LQ5VWI1 586 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 DPY19L2P1Q6NXN4 242 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 SLC30A10Q6XR72 485 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 C12orf56Q8IXR9 622 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 RBM46Q8TBY0 533 aaKnown RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 NSUN6Q8TEA1 469 aaKnown RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 CCDC43Q96MW1 224 aaKnown RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 NOX5Q96PH1 765 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 AGPAT3Q9NRZ7 376 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 PUF60Q9UHX1 559 aaKnown RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ZNF541Q9H0D2 1346 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 CLIC2O15247 247 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 MAPK13O15264 365 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ERLIN1O75477 346 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 GFPT2O94808 682 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ATP1A1P05023 1023 aaKnown RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 MYCLP12524 364 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 PLS3P13797 630 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 RFX1P22670 979 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 YWHABP31946 246 aaKnown RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ITIH3Q06033 890 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 KCNA1Q09470 495 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ZC2HC1CQ53FD0 456 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 NSMFQ6X4W1 530 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 CATSPERGQ6ZRH7 1159 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 VPS36Q86VN1 386 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 SMAP1Q8IYB5 467 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 SYCP3Q8IZU3 236 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 DAW1Q8N136 415 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ZKSCAN4Q969J2 545 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 VTI1AQ96AJ9 217 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ZFP91Q96JP5 570 aaPredicted RBP13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ACCSQ96QU6 501 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 ZNF446Q9NWS9 450 aa13.08□□□□□ -0.32
USP6NL-206ENST00000609853 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 BTNL10A8MVZ5 291 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 NR3C2P08235 984 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
USP6NL-206ENST00000609853 TCP1P17987 556 aaKnown RBP13.07□□□□□ -0.32
USP6NL-206ENST00000609853 SLC9A1P19634 815 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 LMNB1P20700 586 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 CASP4P49662 377 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
USP6NL-206ENST00000609853 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
USP6NL-206ENST00000609853 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
USP6NL-206ENST00000609853 SH3D19Q5HYK7 790 aa13.07□□□□□ -0.32
USP6NL-206ENST00000609853 SNRNP48Q6IEG0 339 aaKnown RBP13.07□□□□□ -0.32
USP6NL-206ENST00000609853 CC2D1AQ6P1N0 951 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms