RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SLC26A6Q9BXS9 759 aa15.16■□□□□ 0.02
POLR2J3-219ENST00000608621 AGXT2Q9BYV1 514 aa15.16■□□□□ 0.02
POLR2J3-219ENST00000608621 UPF3BQ9BZI7 483 aaKnown RBP15.16■□□□□ 0.02
POLR2J3-219ENST00000608621 C1orf112Q9NSG2 853 aa15.16■□□□□ 0.02
POLR2J3-219ENST00000608621 RNF216Q9NWF9 866 aaPredicted RBP15.16■□□□□ 0.02
POLR2J3-219ENST00000608621 TCEAL9Q9UHQ7 104 aa15.16■□□□□ 0.02
POLR2J3-219ENST00000608621 SAMM50Q9Y512 469 aa15.16■□□□□ 0.02
POLR2J3-219ENST00000608621 PCDHB12Q9Y5F1 795 aa15.16■□□□□ 0.02
POLR2J3-219ENST00000608621 NRIP1P48552 1158 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 NDUFV1P49821 464 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 CCT2P78371 535 aaKnown RBP15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 FAM189BP81408 668 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 SMAD4Q13485 552 aaKnown RBP15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 CSPP1Q1MSJ5 1256 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 EFCAB12Q6NXP0 572 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 EFHBQ8N7U6 833 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 MICAL1Q8TDZ2 1067 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 LENG9Q96B70 501 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 MSLNLQ96KJ4 702 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 RNF26Q9BY78 433 aaPredicted RBP15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 AAASQ9NRG9 546 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 NRBP2Q9NSY0 501 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 TYW1Q9NV66 732 aaKnown RBP15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 CEP131Q9UPN4 1083 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 PCDHGC5Q9Y5F6 944 aa15.15■□□□□ 0.02
POLR2J3-219ENST00000608621 NID2Q14112 1375 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 MSH4O15457 936 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 MAGEB2O15479 319 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 IFNAR1P17181 557 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 PSMA5P28066 241 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 PDIA3P30101 505 aaKnown RBP15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 CLCN3P51790 818 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 NLRP11P59045 1033 aaKnown RBP15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 DSC3Q14574 896 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 CCDC148Q8NFR7 591 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 TLE6Q9H808 572 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 NCOA5Q9HCD5 579 aaKnown RBP15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 DISC1Q9NRI5 854 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 TMEM161AQ9NX61 479 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 CLEC1BQ9P126 229 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 VPS54Q9P1Q0 977 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 HCSTQ9UBK5 93 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 AKT3Q9Y243 479 aa15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 FNDC1Q4ZHG4 1894 aaPredicted RBP15.14■□□□□ 0.01
POLR2J3-219ENST00000608621 WDR64B1ANS9 1081 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 ZNF862O60290 1169 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 FGF18O76093 207 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 EYA4O95677 639 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 FGFR1P11362 822 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 TMOD1P28289 359 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 USP11P51784 963 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 NLRP5P59047 1200 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 ERVFC1P60507 584 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 UBE3AQ05086 875 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 LRRC71Q8N4P6 559 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 COLGALT1Q8NBJ5 622 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 ZNF668Q96K58 619 aaPredicted RBP15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 FAM167AQ96KS9 214 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 POP1Q99575 1024 aaKnown RBP15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 ADAMTS10Q9H324 1103 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 CWH43Q9H720 699 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 ELAC1Q9H777 363 aaKnown RBP15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 PLXNA4Q9HCM2 1894 aa15.13■□□□□ 0.01
POLR2J3-219ENST00000608621 PER2O15055 1255 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 OATP04181 439 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 ZSCAN20P17040 1043 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 EVCP57679 992 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 RNF135Q8IUD6 432 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 THNSL1Q8IYQ7 743 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 LINC01465Q8N7H1 131 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 GJA10Q969M2 543 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 MAP7D2Q96T17 732 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 RIT2Q99578 217 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 SH3GLB2Q9NR46 395 aa15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 BARX2Q9UMQ3 279 aaPredicted RBP15.12■□□□□ 0.01
POLR2J3-219ENST00000608621 WDR81Q562E7 1941 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 CHMP2AO43633 222 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 GAS7O60861 476 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 GLP2RO95838 553 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 EIF4BP23588 611 aaKnown RBP15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 PRKCEQ02156 737 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 COASYQ13057 564 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 UGCGQ16739 394 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 LRCH2Q5VUJ6 765 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 TBCKQ8TEA7 893 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 SLC5A5Q92911 643 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 CASD1Q96PB1 797 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 TEKT3Q9BXF9 490 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 TMEM117Q9H0C3 514 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 UNC45AQ9H3U1 944 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 TLR9Q9NR96 1032 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 MUTYHQ9UIF7 546 aa15.11■□□□□ 0.01
POLR2J3-219ENST00000608621 REC8O95072 547 aa15.1■□□□□ 0.01
POLR2J3-219ENST00000608621 LAG3P18627 525 aa15.1■□□□□ 0.01
POLR2J3-219ENST00000608621 SFNP31947 248 aa15.1■□□□□ 0.01
POLR2J3-219ENST00000608621 RBM10P98175 930 aaKnown RBP15.1■□□□□ 0.01
POLR2J3-219ENST00000608621 SSRP1Q08945 709 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms