RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	OVCH1	Q7RTY7	1134 aa		5.78	□□□□□ -1.48
LAMA4-222	ENST00000604740	CACTIN	Q8WUQ7	758 aa	Known RBP	5.78	□□□□□ -1.48
LAMA4-222	ENST00000604740	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.78	□□□□□ -1.48
LAMA4-222	ENST00000604740	TRIM8	Q9BZR9	551 aa		5.78	□□□□□ -1.48
LAMA4-222	ENST00000604740	SNTG2	Q9NY99	539 aa		5.78	□□□□□ -1.48
LAMA4-222	ENST00000604740	B3GALT1	Q9Y5Z6	326 aa		5.78	□□□□□ -1.48
LAMA4-222	ENST00000604740	APEX1	P27695	318 aa	Known RBP	5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	SDHA	P31040	664 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	IRF9	Q00978	393 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	ADAM15	Q13444	863 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	SERINC3	Q13530	473 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	TUBA3C	Q13748	450 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	CATSPERE	Q5SY80	951 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	TUBA3E	Q6PEY2	450 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	BRAP	Q7Z569	592 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	NEU4	Q8WWR8	484 aa	Predicted RBP	5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	DLG3	Q92796	817 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	CHFR	Q96EP1	664 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	SCLY	Q96I15	445 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	GIT1	Q9Y2X7	761 aa		5.77	□□□□□ -1.49
LAMA4-222	ENST00000604740	WDR33	Q9C0J8	1336 aa	Known RBP	5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	GOLGA6L22	H0YM25	854 aa		5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	CRHR2	Q13324	411 aa		5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	RIN1	Q13671	783 aa		5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	TRIM61	Q5EBN2	209 aa		5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	ADGRE4P	Q86SQ3	457 aa		5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	C2orf69	Q8N8R5	385 aa		5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	IGSF22	Q8N9C0	903 aa		5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	DNAJC7	Q99615	494 aa		5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740	AGO3	Q9H9G7	860 aa	Known RBP	5.76	□□□□□ -1.49
LAMA4-222	ENST00000604740		A0A1W2PRX2	142 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	CYP27B1	O15528	508 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	ADH4	P08319	380 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	STAT3	P40763	770 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	ALDH6A1	Q02252	535 aa	Known RBP	5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	TMEM177	Q53S58	311 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	ABHD17C	Q6PCB6	329 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	LRP10	Q7Z4F1	713 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	FGD2	Q7Z6J4	655 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	AMER2	Q8N7J2	671 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	SRPK1	Q96SB4	655 aa	Known RBP	5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	C11orf21	Q9P2W6	132 aa		5.75	□□□□□ -1.49
LAMA4-222	ENST00000604740	TCRBV16S1A1N1	A0A5B0	115 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	PMS2P1	A4D2B8	440 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	KRT37	O76014	449 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	ATP2C1	P98194	919 aa	Predicted RBP	5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	SAFB2	Q14151	953 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	KLHDC10	Q6PID8	442 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	BCL6B	Q8N143	479 aa	Predicted RBP	5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	ZSWIM2	Q8NEG5	633 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	ZNF483	Q8TF39	744 aa	Predicted RBP	5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	RABGGTA	Q92696	567 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	BOC	Q9BWV1	1114 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	MRPL4	Q9BYD3	311 aa	Known RBP	5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	IKZF4	Q9H2S9	585 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	MMRN2	Q9H8L6	949 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	MAGEL2	Q9UJ55	1249 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	VWA7	Q9Y334	891 aa		5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	REXO2	Q9Y3B8	237 aa	Known RBP	5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.74	□□□□□ -1.49
LAMA4-222	ENST00000604740	MAF	O75444	373 aa	Predicted RBP	5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	NPTXR	O95502	500 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	KCNA6	P17658	529 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	DPT	Q07507	201 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	ACAP1	Q15027	740 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	FNDC7	Q5VTL7	733 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	RTN4RL1	Q86UN2	441 aa	Predicted RBP	5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	FOXRED1	Q96CU9	486 aa	Predicted RBP	5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	CEP89	Q96ST8	783 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	FOXB1	Q99853	325 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	CEP72	Q9P209	647 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	SAE1	Q9UBE0	346 aa	Predicted RBP	5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	HECA	Q9UBI9	543 aa	Predicted RBP	5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	SH3BP1	Q9Y3L3	701 aa		5.73	□□□□□ -1.49
LAMA4-222	ENST00000604740	H2AFY	O75367	372 aa	Known RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	MAK	P20794	623 aa		5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	INHBC	P55103	352 aa		5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	SESN2	P58004	480 aa	Predicted RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	RRP1B	Q14684	758 aa	Known RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	SMN1	Q16637	294 aa	Known RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	CC2D1A	Q6P1N0	951 aa	Predicted RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	TMPRSS6	Q8IU80	811 aa		5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	GCDH	Q92947	438 aa	Predicted RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	LPP	Q93052	612 aa		5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	ARMC5	Q96C12	935 aa		5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	MPHOSPH9	Q99550	1183 aa		5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	PARPBP	Q9NWS1	579 aa		5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740	RBM8A	Q9Y5S9	174 aa	Known RBP	5.72	□□□□□ -1.49
LAMA4-222	ENST00000604740		A0A087X1B8	175 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	CCDC163	A0A0D9SF12	145 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	KRTAP23-1	A1A580	65 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	PRL	P01236	227 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	ZBTB48	P10074	688 aa	Predicted RBP	5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	RGS3	P49796	1198 aa		5.71	□□□□□ -1.5
LAMA4-222	ENST00000604740	KIF11	P52732	1056 aa		5.71	□□□□□ -1.5

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