RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 FOXD4L6Q3SYB3 417 aaPredicted RBP15.48■□□□□ 0.07
RNF40-212ENST00000602784 FOXD4L3Q6VB84 417 aaPredicted RBP15.48■□□□□ 0.07
RNF40-212ENST00000602784 MAP7D2Q96T17 732 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 FAM49AQ9H0Q0 323 aaPredicted RBP15.48■□□□□ 0.07
RNF40-212ENST00000602784 CSRNP2Q9H175 543 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 PRO3102Q9H379 93 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 IL23AQ9NPF7 189 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 DNM3Q9UQ16 869 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 SQORQ9Y6N5 450 aa15.48■□□□□ 0.07
RNF40-212ENST00000602784 DGAT1O75907 488 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 CHRNA1P02708 482 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 CXCL10P02778 98 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 POLGP54098 1239 aaPredicted RBP15.47■□□□□ 0.07
RNF40-212ENST00000602784 MGAT3Q09327 533 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 MKRN4PQ13434 485 aaPredicted RBP15.47■□□□□ 0.07
RNF40-212ENST00000602784 GPNMBQ14956 572 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 FAM43BQ6ZT52 329 aaPredicted RBP15.47■□□□□ 0.07
RNF40-212ENST00000602784 CABP7Q86V35 215 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 EVPLQ92817 2033 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 CALML4Q96GE6 196 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 SCLYQ96I15 445 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 CCDC43Q96MW1 224 aaKnown RBP15.47■□□□□ 0.07
RNF40-212ENST00000602784 SH2D3AQ9BRG2 576 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 SCAND2PQ9GZW5 306 aaPredicted RBP15.47■□□□□ 0.07
RNF40-212ENST00000602784 SUGCTQ9HAC7 445 aa15.47■□□□□ 0.07
RNF40-212ENST00000602784 DDX19AQ9NUU7 478 aaKnown RBP15.47■□□□□ 0.07
RNF40-212ENST00000602784 TANC1Q9C0D5 1861 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 M0QZ92 97 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 CUTAO60888 179 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 EYA4O95677 639 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 CLCN3P51790 818 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 GRB10Q13322 594 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 MBTPS1Q14703 1052 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 TMEM119Q4V9L6 283 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 C16orf59Q7L2K0 433 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 LRRC71Q8N4P6 559 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 USP38Q8NB14 1042 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 TCP11Q8WWU5 503 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 VWCEQ96DN2 955 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 CDK5RAP3Q96JB5 506 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 CLIC6Q96NY7 704 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 PNMA5Q96PV4 448 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 CELF4Q9BZC1 486 aaKnown RBP15.46■□□□□ 0.07
RNF40-212ENST00000602784 UBE2OQ9C0C9 1292 aaKnown RBP15.46■□□□□ 0.07
RNF40-212ENST00000602784 TRPV2Q9Y5S1 764 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 CDY2AQ9Y6F7 541 aa15.46■□□□□ 0.07
RNF40-212ENST00000602784 A0A087WWV3 80 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 ARHGEF35A5YM69 484 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 NBNO60934 754 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 GPR32O75388 356 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 CTSHP09668 335 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 TXLNAP40222 546 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 CRYBB1P53674 252 aaPredicted RBP15.45■□□□□ 0.06
RNF40-212ENST00000602784 EPHB4P54760 987 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 EMC2Q15006 297 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 AXDND1Q5T1B0 1012 aaPredicted RBP15.45■□□□□ 0.06
RNF40-212ENST00000602784 PSRC1Q6PGN9 363 aaPredicted RBP15.45■□□□□ 0.06
RNF40-212ENST00000602784 MCPH1Q8NEM0 835 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 LEO1Q8WVC0 666 aaPredicted RBP15.45■□□□□ 0.06
RNF40-212ENST00000602784 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
RNF40-212ENST00000602784 EPSTI1Q96J88 318 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 BHMT2Q9H2M3 363 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 ATP6V0A4Q9HBG4 840 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 SUCLA2Q9P2R7 463 aaPredicted RBP15.45■□□□□ 0.06
RNF40-212ENST00000602784 AKT3Q9Y243 479 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 ARID2Q68CP9 1835 aa15.45■□□□□ 0.06
RNF40-212ENST00000602784 A0A1W2PPC1 479 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 ASAP2O43150 1006 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 CYP11B2P19099 503 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 ME1P48163 572 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 NLRP11P59045 1033 aaKnown RBP15.44■□□□□ 0.06
RNF40-212ENST00000602784 MXD4Q14582 209 aaPredicted RBP15.44■□□□□ 0.06
RNF40-212ENST00000602784 ZRSR1Q15695 479 aaKnown RBP15.44■□□□□ 0.06
RNF40-212ENST00000602784 PLEKHG4Q58EX7 1191 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 SPECC1Q5M775 1068 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 FBXO47Q5MNV8 452 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 TMEM240Q5SV17 173 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 PADI6Q6TGC4 694 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 USP49Q70CQ1 688 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 KCNK18Q7Z418 384 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 PRPF31Q8WWY3 499 aaKnown RBP15.44■□□□□ 0.06
RNF40-212ENST00000602784 PSPC1Q8WXF1 523 aaKnown RBP15.44■□□□□ 0.06
RNF40-212ENST00000602784 IPO9Q96P70 1041 aaKnown RBP15.44■□□□□ 0.06
RNF40-212ENST00000602784 MTRQ99707 1265 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 ADAMTS10Q9H324 1103 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 XPNPEP1Q9NQW7 623 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 PCDH10Q9P2E7 1040 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 CCDC39Q9UFE4 941 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 PCDHA7Q9UN72 937 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 LOXHD1Q8IVV2 1947 aa15.44■□□□□ 0.06
RNF40-212ENST00000602784 E9PMD0 336 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 FGBP02675 491 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 VTNP04004 478 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 NCLP19338 710 aaKnown RBP15.43■□□□□ 0.06
RNF40-212ENST00000602784 TMEM62Q0P6H9 643 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 DRP2Q13474 957 aa15.43■□□□□ 0.06
RNF40-212ENST00000602784 KARSQ15046 597 aaKnown RBP15.43■□□□□ 0.06
RNF40-212ENST00000602784 TSHZ1Q6ZSZ6 1077 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms