RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 BCL2L13Q9BXK5 485 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 VPS16Q9H269 839 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 FAM114A2Q9NRY5 505 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 DDX43Q9NXZ2 648 aaKnown RBP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 DDX56Q9NY93 547 aaKnown RBP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 TRIM10Q9UDY6 481 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 LIMCH1Q9UPQ0 1083 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 DNAJC16Q9Y2G8 782 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 MYH7P12883 1935 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 GLI2P10070 1586 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 FADS2P1A8MWK0 482 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 C19orf81C9J6K1 198 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 ENPP3O14638 875 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 RNF113AO15541 343 aaKnown RBP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 ADAM23O75077 832 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 KRT6AP02538 564 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 KRT6BP04259 564 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 CDK4P11802 303 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 PHBP35232 272 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 RAD23BP54727 409 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 AP2B1P63010 937 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 DNAJC3Q13217 504 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 QPCTQ16769 361 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 TOGARAM2Q6ZUX3 1019 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 SND1Q7KZF4 910 aaKnown RBP eCLIP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 ASRGL1Q7L266 308 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 ZNF572Q7Z3I7 529 aaPredicted RBP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 KRT28Q7Z3Y7 464 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 ITIH5Q86UX2 942 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 CYP4X1Q8N118 509 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 FBXO41Q8TF61 875 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 EME1Q96AY2 570 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 TSKSQ9UJT2 592 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 TRAF3IP3Q9Y228 551 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 MRPL11Q9Y3B7 192 aaKnown RBP9.54□□□□□ -0.88
COMMD3-215ENST00000602574 ATP7AQ04656 1500 aa9.54□□□□□ -0.88
COMMD3-215ENST00000602574 A0A1W2PQ67 120 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 HGSO14964 777 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 ECE2O60344 883 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 TSPAN9O75954 239 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 PAHP00439 452 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CYP1A1P04798 512 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 ABCB1P08183 1280 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 TBXAS1P24557 533 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 VHLP40337 213 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 KRT6CP48668 564 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 PPP2R2AP63151 447 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 SP140Q13342 867 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 PLS1Q14651 629 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 WASHC2DQ5SRD0 308 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 BTBD8Q5XKL5 378 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 FCRLBQ6BAA4 426 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 LRRC8BQ6P9F7 803 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 KLHL35Q6PF15 583 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 B3GNT6Q6ZMB0 384 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 TRIM67Q6ZTA4 783 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 FASTKD5Q7L8L6 764 aaKnown RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 TRPM8Q7Z2W7 1104 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 IFNL1Q8IU54 200 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CCNJLQ8IV13 435 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 MMGT1Q8N4V1 131 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 HCAR2Q8TDS4 363 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 EPS8L3Q8TE67 593 aaKnown RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 OSCP1Q8WVF1 389 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 OTUD5Q96G74 571 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 ZNF512BQ96KM6 892 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 SAMD11Q96NU1 681 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CIB1Q99828 191 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CCSER1Q9C0I3 900 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 ABCG4Q9H172 646 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 SMARCAD1Q9H4L7 1026 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CCSER2Q9H7U1 834 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 MRPL44Q9H9J2 332 aaKnown RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CD93Q9NPY3 652 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 STK32BQ9NY57 414 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 KLHL3Q9UH77 587 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CDK12Q9NYV4 1490 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CLRN2A0PK11 232 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 FOXN3O00409 490 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 YKT6O15498 198 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 TMCC2O75069 709 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CNOT3O75175 753 aaKnown RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 KCNA6P17658 529 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 CFL1P23528 166 aaKnown RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 MZF1P28698 734 aaPredicted RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 GALK1P51570 392 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 TRAPPC3LQ5T215 181 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 DTHD1Q6ZMT9 781 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 INTS8Q75QN2 995 aaKnown RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 RASGRP2Q7LDG7 609 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 USP38Q8NB14 1042 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 SCG3Q8WXD2 468 aaKnown RBP9.53□□□□□ -0.88
COMMD3-215ENST00000602574 PGBD4Q96DM1 585 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 ZIM3Q96PE6 472 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 DHRS9Q9BPW9 319 aa9.53□□□□□ -0.88
COMMD3-215ENST00000602574 PLVAPQ9BX97 442 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms