RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 ZBTB10Q96DT7 871 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 NACC1Q96RE7 527 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 PANK2Q9BZ23 570 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 ZNF302Q9NR11 478 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 DDX19AQ9NUU7 478 aaKnown RBP16.12■□□□□ 0.17
USE1-210ENST00000601662 STK17AQ9UEE5 414 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
USE1-210ENST00000601662 DNM3Q9UQ16 869 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 NRCAMQ92823 1304 aa16.12■□□□□ 0.17
USE1-210ENST00000601662 IGKV6D-21A0A0A0MT36 114 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 TRAK2O60296 914 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 LYPLA2O95372 231 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 CTSHP09668 335 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 SPATA31C1P0DKV0 1188 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 STAT6P42226 847 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 SNW1Q13573 536 aaKnown RBP16.11■□□□□ 0.17
USE1-210ENST00000601662 TRIM71Q2Q1W2 868 aaKnown RBP16.11■□□□□ 0.17
USE1-210ENST00000601662 CCDC60Q8IWA6 550 aaPredicted RBP16.11■□□□□ 0.17
USE1-210ENST00000601662 ELOA2Q8IYF1 753 aaPredicted RBP16.11■□□□□ 0.17
USE1-210ENST00000601662 CEP57L1Q8IYX8 460 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 PDILTQ8N807 584 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 GPT2Q8TD30 523 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 TRAPPC12Q8WVT3 735 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 DYDC2Q96IM9 177 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 LRRC27Q9C0I9 530 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 MAGEF1Q9HAY2 307 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 DACT1Q9NYF0 836 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 RGL1Q9NZL6 768 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 GABBR1Q9UBS5 961 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 KIAA1024Q9UPX6 916 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 SCN5AQ14524 2016 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 LAMA3Q16787 3333 aa16.11■□□□□ 0.17
USE1-210ENST00000601662 POTEB3A0JP26 581 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 GRXCR1A8MXD5 290 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 MED24O75448 989 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 NR1I2O75469 434 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 SLFN14P0C7P3 912 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 HOXC8P31273 242 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 RFC2P35250 354 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 SLC26A2P50443 739 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 CYP4A11Q02928 519 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 GRB10Q13322 594 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 TMEM119Q4V9L6 283 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 POTEBQ6S5H4 581 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 RUFY4Q6ZNE9 571 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 OTUD6AQ7L8S5 288 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 C4orf19Q8IY42 314 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 CNNM3Q8NE01 707 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 DHX58Q96C10 678 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 VWCEQ96DN2 955 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 CXXC1Q9P0U4 656 aaPredicted RBP16.1■□□□□ 0.17
USE1-210ENST00000601662 TUBE1Q9UJT0 475 aa16.1■□□□□ 0.17
USE1-210ENST00000601662 RSPH10B2B2RC85 870 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 RSPH10BP0C881 870 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 ACTN1P12814 892 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 PLCG1P19174 1290 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 ADAM17P78536 824 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 AMPD3Q01432 767 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 CTTNQ14247 550 aaKnown RBP16.09■□□□□ 0.17
USE1-210ENST00000601662 FAM109BQ6ICB4 259 aaPredicted RBP16.09■□□□□ 0.17
USE1-210ENST00000601662 KRBA2Q6ZNG9 492 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 BANK1Q8NDB2 785 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 HERVK_113Q902F9 699 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 PNMA5Q96PV4 448 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 LXNQ9BS40 222 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 FAM49AQ9H0Q0 323 aaPredicted RBP16.09■□□□□ 0.17
USE1-210ENST00000601662 MTIF3Q9H2K0 278 aaKnown RBP16.09■□□□□ 0.17
USE1-210ENST00000601662 NRBP2Q9NSY0 501 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 MAFBQ9Y5Q3 323 aaPredicted RBP16.09■□□□□ 0.17
USE1-210ENST00000601662 TET1Q8NFU7 2136 aa16.09■□□□□ 0.17
USE1-210ENST00000601662 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.08■□□□□ 0.16
USE1-210ENST00000601662 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.08■□□□□ 0.16
USE1-210ENST00000601662 RRN3P2A6NIE6 340 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 NBNO60934 754 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 PFKMP08237 780 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 ATP4AP20648 1035 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 RBL2Q08999 1139 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 GPNMBQ14956 572 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 E2F4Q16254 413 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 LONRF3Q496Y0 759 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 MARCH8Q5T0T0 291 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 Q7L0L9 218 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 SV2BQ7L1I2 683 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 ATP8B4Q8TF62 1192 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 DNAJB3Q8WWF6 145 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 FAM167AQ96KS9 214 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 PLIN2Q99541 437 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 ANKEF1Q9NU02 776 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 SERTAD1Q9UHV2 236 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 SLC4A7Q9Y6M7 1214 aa16.08■□□□□ 0.16
USE1-210ENST00000601662 A0A087X0B3 334 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 ACTN4O43707 911 aaKnown RBP16.07■□□□□ 0.16
USE1-210ENST00000601662 HBP1O60381 514 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 LETM1O95202 739 aaPredicted RBP16.07■□□□□ 0.16
USE1-210ENST00000601662 EYA4O95677 639 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 MYL1P05976 194 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 MBTPS1Q14703 1052 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 ECM1Q16610 540 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 XKR3Q5GH77 459 aa16.07■□□□□ 0.16
USE1-210ENST00000601662 TRAF7Q6Q0C0 670 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms