RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 GIT2Q14161 759 aa10.62□□□□□ -0.71
NFKB1-212ENST00000600343 ZNF449Q6P9G9 518 aa10.62□□□□□ -0.71
NFKB1-212ENST00000600343 C3orf62Q6ZUJ4 267 aa10.62□□□□□ -0.71
NFKB1-212ENST00000600343 SATL1Q86VE3 508 aa10.62□□□□□ -0.71
NFKB1-212ENST00000600343 DTX3LQ8TDB6 740 aa10.62□□□□□ -0.71
NFKB1-212ENST00000600343 BHMT2Q9H2M3 363 aa10.62□□□□□ -0.71
NFKB1-212ENST00000600343 PRKAG3Q9UGI9 489 aa10.62□□□□□ -0.71
NFKB1-212ENST00000600343 TBC1D30Q9Y2I9 924 aa10.62□□□□□ -0.71
NFKB1-212ENST00000600343 ARHGAP5Q13017 1502 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 CCDC160A6NGH7 325 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 KRT36O76013 467 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 FTCDO95954 541 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 VDRP11473 427 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 MARK3P27448 753 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 MGAT5Q09328 741 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 ECHDC2Q86YB7 292 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 ARHGEF2Q92974 986 aaKnown RBP10.61□□□□□ -0.71
NFKB1-212ENST00000600343 MTMR8Q96EF0 704 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 PAGE5Q96GU1 130 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 NACAP1Q9BZK3 213 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 SALL4Q9UJQ4 1053 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 KIF1BO60333 1816 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 ZNF609O15014 1411 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 OR6B1O95007 311 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 HSPA8P11142 646 aaKnown RBP10.61□□□□□ -0.71
NFKB1-212ENST00000600343 COG7P83436 770 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 CYP4A11Q02928 519 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 ITGA9Q13797 1035 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 VWA3BQ502W6 1294 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 USP49Q70CQ1 688 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 ANKLE1Q8NAG6 615 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 ANKK1Q8NFD2 765 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 LPIN2Q92539 896 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 TPK1Q9H3S4 243 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 RETREG1Q9H6L5 497 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 NDUFA13Q9P0J0 144 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 SEC63Q9UGP8 760 aaKnown RBP10.61□□□□□ -0.71
NFKB1-212ENST00000600343 MAP2P11137 1827 aaKnown RBP10.61□□□□□ -0.71
NFKB1-212ENST00000600343 ATP7AQ04656 1500 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 TMEM94Q12767 1356 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 NPATQ14207 1427 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 FBP2O00757 339 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 TBC1D12O60347 775 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 AGTP01019 485 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 TMEM214Q6NUQ4 689 aaKnown RBP10.61□□□□□ -0.71
NFKB1-212ENST00000600343 KRT27Q7Z3Y8 459 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 RIC3Q7Z5B4 369 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 KBTBD2Q8IY47 623 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 STMN2Q93045 179 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 INPP4AQ96PE3 977 aaPredicted RBP10.61□□□□□ -0.71
NFKB1-212ENST00000600343 STK33Q9BYT3 514 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 KIAA1683Q9H0B3 1180 aa10.61□□□□□ -0.71
NFKB1-212ENST00000600343 DDX43Q9NXZ2 648 aaKnown RBP10.61□□□□□ -0.71
NFKB1-212ENST00000600343 LAMA4Q16363 1823 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 SPECC1L-ADORA2AF8WAN1 911 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 HLFQ16534 295 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 TAOK1Q7L7X3 1001 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 TTC30AQ86WT1 665 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 ZNF713Q8N859 430 aaPredicted RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 DGCR14Q96DF8 476 aaKnown RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 CGREF1Q99674 301 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 ABCA8O94911 1581 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 MATN2O00339 956 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 KDM1AO60341 852 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 ENDOUP21128 410 aaKnown RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 DNM2P50570 870 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 IGBP1P78318 339 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 RELAQ04206 551 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 DENND2CQ68D51 928 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 TRPC7Q9HCX4 862 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 FAF1Q9UNN5 650 aaPredicted RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 A0A0G2JLW4 131 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 TBX10O75333 385 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 VPS41P49754 854 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 KLK7P49862 253 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 CCT8P50990 548 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 KCTD19Q17RG1 926 aaPredicted RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 C4orf50Q6ZRC1 276 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 CAPN12Q6ZSI9 719 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 SLC43A3Q8NBI5 491 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 ZNF507Q8TCN5 953 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 PRPF31Q8WWY3 499 aaKnown RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 STMN4Q9H169 189 aaPredicted RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 MAGEC2Q9UBF1 373 aaPredicted RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 PACSIN2Q9UNF0 486 aaPredicted RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 HPS5Q9UPZ3 1129 aa10.6□□□□□ -0.71
NFKB1-212ENST00000600343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.6□□□□□ -0.71
NFKB1-212ENST00000600343 PALMO75781 387 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 RXRGP48443 463 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 FOXD4Q12950 439 aaPredicted RBP10.59□□□□□ -0.71
NFKB1-212ENST00000600343 RFWD3Q6PCD5 774 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 RSPH3Q86UC2 560 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 C2CD5Q86YS7 1000 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 ZBED8Q8IZ13 594 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 CSRNP2Q9H175 543 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 KRT82Q9NSB4 513 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 TMA7Q9Y2S6 64 aaKnown RBP10.59□□□□□ -0.71
NFKB1-212ENST00000600343 HBS1LQ9Y450 684 aaKnown RBP10.59□□□□□ -0.71
NFKB1-212ENST00000600343 MGEA5O60502 916 aa10.59□□□□□ -0.71
NFKB1-212ENST00000600343 CBFA2T3O75081 653 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms