RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 RINT1Q6NUQ1 792 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 KRBA2Q6ZNG9 492 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 SH3RF1Q7Z6J0 888 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 SERINC5Q86VE9 423 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 TNS4Q8IZW8 715 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 CCDC155Q8N6L0 562 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 DRC1Q96MC2 740 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 C7orf25Q9BPX7 421 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 SENP6Q9GZR1 1112 aaPredicted RBP13.66□□□□□ -0.22
TGFB1-204ENST00000600196 ATP6V0A4Q9HBG4 840 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 SEL1LQ9UBV2 794 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 TUBE1Q9UJT0 475 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 WDR81Q562E7 1941 aa13.66□□□□□ -0.22
TGFB1-204ENST00000600196 DOCK5Q9H7D0 1870 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 A0A087X0B3 334 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 DCDC2CA8MYV0 355 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 E9PMD0 336 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 H0YCG3 227 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 ACTN4O43707 911 aaKnown RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 KINO60870 393 aaKnown RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 MYCP01106 439 aaPredicted RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 CD4P01730 458 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 MAPTP10636 758 aaKnown RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 MARK3P27448 753 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 POLGP54098 1239 aaPredicted RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 PPP2R5AQ15172 486 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 MARCH8Q5T0T0 291 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 LINC01465Q8N7H1 131 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 CNNM3Q8NE01 707 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 DHX58Q96C10 678 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 PAWRQ96IZ0 340 aaKnown RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 MTRQ99707 1265 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 NTPCRQ9BSD7 190 aaKnown RBP13.65□□□□□ -0.22
TGFB1-204ENST00000600196 NFKBIZQ9BYH8 718 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 SQORQ9Y6N5 450 aa13.65□□□□□ -0.22
TGFB1-204ENST00000600196 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 GTPBP6O43824 516 aaPredicted RBP13.64□□□□□ -0.23
TGFB1-204ENST00000600196 GADD45BO75293 160 aaPredicted RBP13.64□□□□□ -0.23
TGFB1-204ENST00000600196 GAP43P17677 238 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 ARL2P36404 184 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 ZNF131P52739 623 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 NPEPPSP55786 919 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 PSMD2Q13200 908 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 BFSP2Q13515 415 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 ZRSR1Q15695 479 aaKnown RBP13.64□□□□□ -0.23
TGFB1-204ENST00000600196 LONRF3Q496Y0 759 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 MTERF2Q49AM1 385 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 KCNK18Q7Z418 384 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 FAM126BQ8IXS8 530 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 PDILTQ8N807 584 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 CCDC47Q96A33 483 aaKnown RBP13.64□□□□□ -0.23
TGFB1-204ENST00000600196 PAGE5Q96GU1 130 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 MAP7D2Q96T17 732 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 HTATIP2Q9BUP3 242 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 SETD4Q9NVD3 440 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 LARSQ9P2J5 1176 aaKnown RBP13.64□□□□□ -0.23
TGFB1-204ENST00000600196 COL4A3BPQ9Y5P4 624 aa13.64□□□□□ -0.23
TGFB1-204ENST00000600196 FRMD3A2A2Y4 597 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 EN2P19622 333 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-204ENST00000600196 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-204ENST00000600196 TFDP1Q14186 410 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 MCM6Q14566 821 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 EMC2Q15006 297 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 PTGISQ16647 500 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 FAM26DQ5JW98 314 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 ODR4Q5SWX8 454 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 GDF6Q6KF10 455 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-204ENST00000600196 EFCAB12Q6NXP0 572 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 ZNF410Q86VK4 478 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-204ENST00000600196 KIAA0319LQ8IZA0 1049 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 USP38Q8NB14 1042 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 SPIRE2Q8WWL2 714 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 PSPC1Q8WXF1 523 aaKnown RBP13.63□□□□□ -0.23
TGFB1-204ENST00000600196 SYAP1Q96A49 352 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-204ENST00000600196 GSDMAQ96QA5 445 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 PANK2Q9BZ23 570 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 INO80BQ9C086 356 aaPredicted RBP13.63□□□□□ -0.23
TGFB1-204ENST00000600196 GOLPH3LQ9H4A5 285 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 DACT1Q9NYF0 836 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 SERTAD1Q9UHV2 236 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 NOD1Q9Y239 953 aa13.63□□□□□ -0.23
TGFB1-204ENST00000600196 ZBTB39O15060 712 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 NR1I2O75469 434 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 LETM1O95202 739 aaPredicted RBP13.62□□□□□ -0.23
TGFB1-204ENST00000600196 SMC2O95347 1197 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 CYP2C9P11712 490 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 EFNA5P52803 228 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 ALCAMQ13740 583 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 GIT2Q14161 759 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 KCNB1Q14721 858 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 KLHL40Q2TBA0 621 aa13.62□□□□□ -0.23
TGFB1-204ENST00000600196 ARSHQ5FYA8 562 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms