RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CHST13Q8NET6 341 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 STRA6Q9BX79 667 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 MOV10L1Q9BXT6 1211 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 ZNHIT6Q9NWK9 470 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 ARMCX3Q9UH62 379 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 LOXHD1Q8IVV2 1947 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 LOC285556D6RIA3 1793 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 KIAA1217Q5T5P2 1943 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 PPP1R37O75864 691 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 HNRNPH3P31942 346 aaKnown RBP18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 GTF2A2P52657 109 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 NPEPPSP55786 919 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 PLA2G4FQ68DD2 849 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 ZNF746Q6NUN9 644 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 GPIHBP1Q8IV16 184 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 SENP7Q9BQF6 1050 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 NHEJ1Q9H9Q4 299 aaPredicted RBP18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 TCEAL9Q9UHQ7 104 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 FAM184BQ9ULE4 1060 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 PLAGL2Q9UPG8 496 aa18.73■□□□□ 0.59
SHKBP1-216ENST00000598201 PLEKP08567 350 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 VEGFBP49765 207 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 HERVK_113P62684 666 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 NOGQ13253 232 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 ZNF710Q8N1W2 664 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 PROCA1Q8NCQ7 364 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 NEK11Q8NG66 645 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 MS4A4AQ96JQ5 239 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 R3HDMLQ9H3Y0 253 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 PCDHA10Q9Y5I2 948 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 A0A0G2JMZ2 1700 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 LRRC53A6NM62 1247 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 SORBS3O60504 671 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 RPL13P26373 211 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 CASQ1P31415 396 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 CDK17Q00537 523 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 RRAGAQ7L523 313 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 RIOX2Q8IUF8 465 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 ANKRD35Q8N283 1001 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 LRRN4CLQ8ND94 238 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 LSM14BQ9BX40 385 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 TFR2Q9UP52 801 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 MYH11P35749 1972 aa18.72■□□□□ 0.59
SHKBP1-216ENST00000598201 UBE4BO95155 1302 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 SPATA31C2B4DYI2 1134 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 URI1O94763 535 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 SP4Q02446 784 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 ARHGAP29Q52LW3 1261 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 ANO5Q75V66 913 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 RDM1Q8NG50 284 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 BORCS6Q96GS4 357 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 MAF1Q9H063 256 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 SPATC1LQ9H0A9 340 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 ASCC2Q9H1I8 757 aaPredicted RBP18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 GPRC5CQ9NQ84 441 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 ARHGAP20Q9P2F6 1191 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 TRIM10Q9UDY6 481 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 PCDHB13Q9Y5F0 798 aa18.71■□□□□ 0.59
SHKBP1-216ENST00000598201 MANSC4A6NHS7 340 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 SLC16A3O15427 465 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 ZNF862O60290 1169 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 AOC2O75106 756 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 CNMDO75829 334 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 CETPP11597 493 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 IRX3P78415 501 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 SP2Q02086 613 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 NFIL3Q16649 462 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 XKR9Q5GH70 373 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 PDXDC1Q6P996 788 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 ZIC5Q96T25 663 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 PAGR1Q9BTK6 254 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 NLRC4Q9NPP4 1024 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 AGPAT3Q9NRZ7 376 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 GABBR1Q9UBS5 961 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 CCL15-CCL14A0A0B4J2E2 113 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 K7ENM7 598 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 STAM2O75886 525 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 STBD1O95210 358 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 SLU7O95391 586 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 EPB41P11171 864 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 NCBP1Q09161 790 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 MOGSQ13724 837 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 CCL15Q16663 113 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 STXBP4Q6ZWJ1 553 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 DNERQ8NFT8 737 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 CCDC43Q96MW1 224 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 IWS1Q96ST2 819 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 GBP3Q9H0R5 595 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 DOCK5Q9H7D0 1870 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 JPH1Q9HDC5 661 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 ANKEF1Q9NU02 776 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 LARSQ9P2J5 1176 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 NFASCO94856 1347 aa18.7■□□□□ 0.58
SHKBP1-216ENST00000598201 KIF5CO60282 957 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 AFPP02771 609 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 XRCC5P13010 732 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 PLS3P13797 630 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 DCAF17Q5H9S7 520 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 DPY19L2P1Q6NXN4 242 aa18.69■□□□□ 0.58
SHKBP1-216ENST00000598201 FASTKD5Q7L8L6 764 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms