RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 MAP7D2Q96T17 732 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 DDX19AQ9NUU7 478 aaKnown RBP16.02■□□□□ 0.16
LIG1-208ENST00000595758 FBXO2Q9UK22 296 aaPredicted RBP16.02■□□□□ 0.16
LIG1-208ENST00000595758 DBR1Q9UK59 544 aaKnown RBP16.02■□□□□ 0.16
LIG1-208ENST00000595758 CFAP45Q9UL16 551 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 AKT3Q9Y243 479 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 ATP6V1DQ9Y5K8 247 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 TRPV2Q9Y5S1 764 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 CDY2AQ9Y6F7 541 aa16.02■□□□□ 0.16
LIG1-208ENST00000595758 SPTLC2O15270 562 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 YEATS4O95619 227 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 FGBP02675 491 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 CXCL10P02778 98 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 PFKMP08237 780 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 DDIT3P35638 169 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 RARRES1P49788 294 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 DNM1Q05193 864 aaKnown RBP16.01■□□□□ 0.15
LIG1-208ENST00000595758 MGAT3Q09327 533 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 MKRN4PQ13434 485 aaPredicted RBP16.01■□□□□ 0.15
LIG1-208ENST00000595758 TMEM240Q5SV17 173 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 PSRC1Q6PGN9 363 aaPredicted RBP16.01■□□□□ 0.15
LIG1-208ENST00000595758 ZNF365Q70YC5 407 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 CABP7Q86V35 215 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 KRI1Q8N9T8 703 aaKnown RBP16.01■□□□□ 0.15
LIG1-208ENST00000595758 VWCEQ96DN2 955 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.151e-6■□□□□ 10.6
LIG1-208ENST00000595758 CELF4Q9BZC1 486 aaKnown RBP16.01■□□□□ 0.15
LIG1-208ENST00000595758 CSRNP2Q9H175 543 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 DHX33Q9H6R0 707 aaKnown RBP16.01■□□□□ 0.15
LIG1-208ENST00000595758 DNM3Q9UQ16 869 aa16.01■□□□□ 0.15
LIG1-208ENST00000595758 KDM3AQ9Y4C1 1321 aa16■□□□□ 0.15
LIG1-208ENST00000595758 ARHGEF35A5YM69 484 aa16■□□□□ 0.15
LIG1-208ENST00000595758 SLC26A4O43511 780 aa16■□□□□ 0.15
LIG1-208ENST00000595758 DGAT1O75907 488 aa16■□□□□ 0.15
LIG1-208ENST00000595758 VTNP04004 478 aa16■□□□□ 0.15
LIG1-208ENST00000595758 DRP2Q13474 957 aa16■□□□□ 0.15
LIG1-208ENST00000595758 EMC2Q15006 297 aa16■□□□□ 0.15
LIG1-208ENST00000595758 SHHQ15465 462 aa16■□□□□ 0.15
LIG1-208ENST00000595758 C9orf50Q5SZB4 431 aa16■□□□□ 0.15
LIG1-208ENST00000595758 ZNF710Q8N1W2 664 aa16■□□□□ 0.15
LIG1-208ENST00000595758 CDK5RAP3Q96JB5 506 aa16■□□□□ 0.15
LIG1-208ENST00000595758 CLIC6Q96NY7 704 aa16■□□□□ 0.15
LIG1-208ENST00000595758 BMP2KQ9NSY1 1161 aaPredicted RBP16■□□□□ 0.15
LIG1-208ENST00000595758 SUCLA2Q9P2R7 463 aaPredicted RBP16■□□□□ 0.15
LIG1-208ENST00000595758 GINS2Q9Y248 185 aa16■□□□□ 0.15
LIG1-208ENST00000595758 EVPLQ92817 2033 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 A0A1W2PPC1 479 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 GAS2O43903 313 aaKnown RBP15.99■□□□□ 0.15
LIG1-208ENST00000595758 PPP6R2O75170 966 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 ACTN1P12814 892 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 NLRP11P59045 1033 aaKnown RBP15.99■□□□□ 0.15
LIG1-208ENST00000595758 KIZQ2M2Z5 673 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 FBXO47Q5MNV8 452 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 HYIQ5T013 277 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 TDHQ8IZJ6 230 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 KCTD17Q8N5Z5 321 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 KCNG4Q8TDN1 519 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 SEPT8Q92599 483 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 TMEM143Q96AN5 459 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 CALML4Q96GE6 196 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 PNMA5Q96PV4 448 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 PPP1R16BQ96T49 567 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 PLIN2Q99541 437 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 MTRQ99707 1265 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 OSBPL7Q9BZF2 842 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 NT5C3AQ9H0P0 336 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 ATP6V0A4Q9HBG4 840 aa15.99■□□□□ 0.15
LIG1-208ENST00000595758 E9PMD0 336 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 USO1O60763 962 aaKnown RBP15.98■□□□□ 0.15
LIG1-208ENST00000595758 GPR32O75388 356 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 EYA4O95677 639 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 GHRP10912 638 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
LIG1-208ENST00000595758 CRYBB1P53674 252 aaPredicted RBP15.98■□□□□ 0.15
LIG1-208ENST00000595758 CDC42EP1Q00587 391 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 GRB10Q13322 594 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 SCN5AQ14524 2016 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 LPIN1Q14693 890 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 SPECC1Q5M775 1068 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 CNKSR3Q6P9H4 555 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 PADI6Q6TGC4 694 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 USP49Q70CQ1 688 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 OTOP2Q7RTS6 562 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 RASSF8Q8NHQ8 419 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 TCP11Q8WWU5 503 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 HERVK_113Q902F9 699 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 EPSTI1Q96J88 318 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 RNPC3Q96LT9 517 aaKnown RBP15.98■□□□□ 0.15
LIG1-208ENST00000595758 TANC1Q9C0D5 1861 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 CCSER1Q9C0I3 900 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 MTIF3Q9H2K0 278 aaKnown RBP15.98■□□□□ 0.15
LIG1-208ENST00000595758 BHMT2Q9H2M3 363 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 ADAMTS10Q9H324 1103 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 CDHR5Q9HBB8 845 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 XPNPEP1Q9NQW7 623 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 RCOR1Q9UKL0 485 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 SQORQ9Y6N5 450 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 TRIOBPQ9H2D6 2365 aa15.98■□□□□ 0.15
LIG1-208ENST00000595758 CYP11B2P19099 503 aa15.97■□□□□ 0.15
LIG1-208ENST00000595758 KRT85P78386 507 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms