RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 M0QZ92 97 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 MAFO75444 373 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 LYPLA2O95372 231 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 PARNO95453 639 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 F13A1P00488 732 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 ZSCAN22P10073 491 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 ACTN1P12814 892 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 RPA1P27694 616 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 FXR1P51114 621 aaKnown RBP eCLIP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 PTPAQ15257 358 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 KIZQ2M2Z5 673 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 LRIT3Q3SXY7 679 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 FOXD4L6Q3SYB3 417 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 IER5Q5VY09 327 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 FOXD4L3Q6VB84 417 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 ERMNQ8TAM6 284 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 SNX29Q8TEQ0 813 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 TMEM40Q8WWA1 233 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 MAP7D2Q96T17 732 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 OSMRQ99650 979 aa15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 MMTAG2Q9BU76 263 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 ZSCAN16Q9H4T2 348 aaPredicted RBP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 AGO3Q9H9G7 860 aaKnown RBP15.4■□□□□ 0.06
SHKBP1-207ENST00000595631 GPR32O75388 356 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 NLRP11P59045 1033 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 DEFB103AP81534 67 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 BECN1Q14457 450 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 PDIA5Q14554 519 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 EMC2Q15006 297 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 ARL6IP4Q66PJ3 421 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 HAUS3Q68CZ6 603 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 OTUD6AQ7L8S5 288 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 TMCO2Q7Z6W1 182 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 KSR1Q8IVT5 923 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 NME8Q8N427 588 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 TMEM143Q96AN5 459 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 IFIH1Q9BYX4 1025 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 DHX33Q9H6R0 707 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 ANKEF1Q9NU02 776 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 KDM3AQ9Y4C1 1321 aa15.39■□□□□ 0.05
SHKBP1-207ENST00000595631 RPLP2P05387 115 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 TMOD1P28289 359 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 CD52P31358 61 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 RARRES1P49788 294 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 GPC3P51654 580 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 WDR5P61964 334 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 ZRSR1Q15695 479 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 TSHZ1Q6ZSZ6 1077 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 SEPT8Q92599 483 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 CCDC43Q96MW1 224 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 PLIN2Q99541 437 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 RAB34Q9BZG1 259 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 XPNPEP1Q9NQW7 623 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 SUCLA2Q9P2R7 463 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 TFIP11Q9UBB9 837 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 DAXXQ9UER7 740 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 KIAA1024Q9UPX6 916 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 ZDHHC9Q9Y397 364 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 NOC2LQ9Y3T9 749 aaKnown RBP15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 SLC4A7Q9Y6M7 1214 aa15.38■□□□□ 0.05
SHKBP1-207ENST00000595631 USO1O60763 962 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 BAIAP3O94812 1187 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 BMP15O95972 392 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 PBX2P40425 430 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 RFC5P40937 340 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 RABGGTBP53611 331 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 KRT79Q5XKE5 535 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 KCNK18Q7Z418 384 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 RHPN2Q8IUC4 686 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 SLC7A3Q8WY07 619 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 CHAMP1Q96JM3 812 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 PNMA5Q96PV4 448 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 NACC1Q96RE7 527 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 MTIF3Q9H2K0 278 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 ADAMTS10Q9H324 1103 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 DDX19AQ9NUU7 478 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 PADI3Q9ULW8 664 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 NLRC5Q86WI3 1866 aa15.37■□□□□ 0.05
SHKBP1-207ENST00000595631 TTC3P53804 2025 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 KIAA1671Q9BY89 1806 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 ABHD14A-ACY1A0A1B0GW23 586 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 E9PMD0 336 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 CSDE1O75534 798 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 FGFR4P22455 802 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 CRYBB1P53674 252 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 PAK2Q13177 524 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 GRB10Q13322 594 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 IKBKEQ14164 716 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 SPECC1Q5M775 1068 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 MAEAQ7L5Y9 396 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 FAM228AQ86W67 206 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 LINC01599Q8WXQ3 324 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 NLRP4Q96MN2 994 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 SCLT1Q96NL6 688 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 CLIC6Q96NY7 704 aa15.36■□□□□ 0.05
SHKBP1-207ENST00000595631 MTRQ99707 1265 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms