RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 PPP1R18Q6NYC8 613 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 TATDN1Q6P1N9 297 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 MYCBPAPQ8TBZ2 947 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 ARMCX3Q9UH62 379 aaPredicted RBP16.72■□□□□ 0.27
ZNF541-205ENST00000595558 NR2E1Q9Y466 385 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 FOCADQ5VW36 1801 aa16.72■□□□□ 0.27
ZNF541-205ENST00000595558 E7EVH7 732 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 DAPK3O43293 454 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 FNTAP49354 379 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 EXOC3L4Q17RC7 722 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 CHADLQ6NUI6 762 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 NLRP14Q86W24 1093 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 TPCN2Q8NHX9 752 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 C7orf43Q8WVR3 580 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 LENG9Q96B70 501 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 SH2D3AQ9BRG2 576 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 BCCIPQ9P287 314 aaKnown RBP eCLIP16.71■□□□□ 0.27
ZNF541-205ENST00000595558 BCS1LQ9Y276 419 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 KDM3AQ9Y4C1 1321 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 FRMD3A2A2Y4 597 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 MEFVO15553 781 aaPredicted RBP16.71■□□□□ 0.27
ZNF541-205ENST00000595558 ZNF844Q08AG5 666 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 FBXO11Q86XK2 927 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 OTUD6BQ8N6M0 293 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 CCDC17Q96LX7 622 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 IDI2Q9BXS1 227 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 SIX2Q9NPC8 291 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 NRXN2Q9P2S2 1712 aa16.71■□□□□ 0.27
ZNF541-205ENST00000595558 AFPP02771 609 aaKnown RBP16.7■□□□□ 0.26
ZNF541-205ENST00000595558 SPATA31C1P0DKV0 1188 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 COPB2P35606 906 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 SPIRE1Q08AE8 756 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 CTTNQ14247 550 aaKnown RBP16.7■□□□□ 0.26
ZNF541-205ENST00000595558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.7■□□□□ 0.26
ZNF541-205ENST00000595558 PLCB1Q9NQ66 1216 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 NYAP2Q9P242 653 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 CNOT8Q9UFF9 292 aaKnown RBP16.7■□□□□ 0.26
ZNF541-205ENST00000595558 FBXL5Q9UKA1 691 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 PRR12Q9ULL5 1215 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 KRIT1O00522 736 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 DDX3XO00571 662 aaKnown RBP eCLIP16.7■□□□□ 0.26
ZNF541-205ENST00000595558 TTI1O43156 1089 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 CTNNA1P35221 906 aaKnown RBP16.7■□□□□ 0.26
ZNF541-205ENST00000595558 EPHA7Q15375 998 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 KNOP1Q1ED39 458 aaKnown RBP16.7■□□□□ 0.26
ZNF541-205ENST00000595558 EDRF1Q3B7T1 1238 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 EMC10Q5UCC4 262 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 SYDE2Q5VT97 1194 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 B4GALNT4Q76KP1 1039 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 MKL1Q969V6 931 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 OSGEPQ9NPF4 335 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 SIPA1L1O43166 1804 aa16.7■□□□□ 0.26
ZNF541-205ENST00000595558 MSH4O15457 936 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 BMP3P12645 472 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
ZNF541-205ENST00000595558 GUCY2CP25092 1073 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 IFT88Q13099 833 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 RBM26Q5T8P6 1007 aaKnown RBP16.69■□□□□ 0.26
ZNF541-205ENST00000595558 RNF187Q5TA31 235 aaPredicted RBP16.69■□□□□ 0.26
ZNF541-205ENST00000595558 ADAT2Q7Z6V5 191 aaKnown RBP16.69■□□□□ 0.26
ZNF541-205ENST00000595558 ETNPPLQ8TBG4 499 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 ACTRT1Q8TDG2 376 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 UBLCP1Q8WVY7 318 aaPredicted RBP16.69■□□□□ 0.26
ZNF541-205ENST00000595558 AMNQ9BXJ7 453 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 TRIM31Q9BZY9 425 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 DPH5Q9H2P9 285 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 PCDHB13Q9Y5F0 798 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 HMGB1P1B2RPK0 211 aaPredicted RBP16.69■□□□□ 0.26
ZNF541-205ENST00000595558 GFPT2O94808 682 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 XRCC5P13010 732 aaKnown RBP16.69■□□□□ 0.26
ZNF541-205ENST00000595558 SPRED3Q2MJR0 410 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 TMEM179Q6ZVK1 233 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 PEX26Q7Z412 305 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 U2AF1L4Q8WU68 220 aaKnown RBP16.69■□□□□ 0.26
ZNF541-205ENST00000595558 BHMT2Q9H2M3 363 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 ASTN1O14525 1302 aa16.69■□□□□ 0.26
ZNF541-205ENST00000595558 GCOM1H8Y6P7 765 aaPredicted RBP16.68■□□□□ 0.26
ZNF541-205ENST00000595558 PGRMC1O00264 195 aaKnown RBP16.68■□□□□ 0.26
ZNF541-205ENST00000595558 MYZAPP0CAP1 466 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 QPCTQ16769 361 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 SUGP1Q8IWZ8 645 aaKnown RBP16.68■□□□□ 0.26
ZNF541-205ENST00000595558 OLIG1Q8TAK6 271 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.68■□□□□ 0.26
ZNF541-205ENST00000595558 RUSC1Q9BVN2 902 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 TRAF3IP3Q9Y228 551 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 SPDYE3A6NKU9 549 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 BTNL10A8MVZ5 291 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 KIAA0754O94854 1291 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 TBC1D10BQ4KMP7 808 aaPredicted RBP16.68■□□□□ 0.26
ZNF541-205ENST00000595558 EPM2AIP1Q7L775 607 aaPredicted RBP16.68■□□□□ 0.26
ZNF541-205ENST00000595558 FRMD5Q7Z6J6 570 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 DAAM2Q86T65 1068 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 SLC35C1Q96A29 364 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 PBKQ96KB5 322 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 TRIM51Q9BSJ1 452 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 GCNT4Q9P109 453 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 NENFQ9UMX5 172 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 FZD1Q9UP38 647 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
ZNF541-205ENST00000595558 DDX39AO00148 427 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms