RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 CDHR5Q9HBB8 845 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 RGS18Q9NS28 235 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 FAM217BQ9NTX9 383 aaPredicted RBP16.71■□□□□ 0.27
PNKP-202ENST00000593706 CLEC1BQ9P126 229 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 ST3GAL5Q9UNP4 418 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 NID2Q14112 1375 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 MYO10Q9HD67 2058 aa16.71■□□□□ 0.27
PNKP-202ENST00000593706 IGLV3-22A0A075B6J6 115 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 FSD2A1L4K1 749 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 ZBTB42B2RXF5 422 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 FGF18O76093 207 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 C22orf31O95567 290 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 VTNP04004 478 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 CDC27P30260 824 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 PFKFB3Q16875 520 aaPredicted RBP16.7■□□□□ 0.26
PNKP-202ENST00000593706 FAM102BQ5T8I3 360 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 COLGALT1Q8NBJ5 622 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 CCDC12Q8WUD4 166 aaPredicted RBP16.7■□□□□ 0.26
PNKP-202ENST00000593706 BBXQ8WY36 941 aaPredicted RBP16.7■□□□□ 0.26
PNKP-202ENST00000593706 FBXL18Q96ME1 805 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 ATP6V0A4Q9HBG4 840 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 C6orf50Q9HD87 102 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 TBC1D22BQ9NU19 505 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 HCSTQ9UBK5 93 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 CEP131Q9UPN4 1083 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 USP15Q9Y4E8 981 aaPredicted RBP16.7■□□□□ 0.26
PNKP-202ENST00000593706 SAMM50Q9Y512 469 aa16.7■□□□□ 0.26
PNKP-202ENST00000593706 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 C9IYK1 514 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 SRGAP2BP0DMP2 458 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 FGFR1P11362 822 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 CRYBB1P53674 252 aaPredicted RBP16.69■□□□□ 0.26
PNKP-202ENST00000593706 NHLH1Q02575 133 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 MCTP2Q6DN12 878 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 ZNF746Q6NUN9 644 aaPredicted RBP16.69■□□□□ 0.26
PNKP-202ENST00000593706 FAM228AQ86W67 206 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 SMAP1Q8IYB5 467 aaPredicted RBP16.69■□□□□ 0.26
PNKP-202ENST00000593706 JAKMIP1Q96N16 626 aaKnown RBP16.69■□□□□ 0.26
PNKP-202ENST00000593706 MAP7D2Q96T17 732 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 TMEM161AQ9NX61 479 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 AKT3Q9Y243 479 aa16.69■□□□□ 0.26
PNKP-202ENST00000593706 PER2O15055 1255 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 DHX15O43143 795 aaKnown RBP16.68■□□□□ 0.26
PNKP-202ENST00000593706 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
PNKP-202ENST00000593706 PSAPP07602 524 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 CYP3A4P08684 503 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 LAG3P18627 525 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 ATP4AP20648 1035 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 RPS6KB1P23443 525 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 ADD1P35611 737 aaKnown RBP16.68■□□□□ 0.26
PNKP-202ENST00000593706 MRE11P49959 708 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 CLCN3P51790 818 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 PRR16Q569H4 304 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 PLPP4Q5VZY2 271 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 EDAQ92838 391 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 FAM167AQ96KS9 214 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 ENTPD7Q9NQZ7 604 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 TYW1Q9NV66 732 aaKnown RBP16.68■□□□□ 0.26
PNKP-202ENST00000593706 PCDHA10Q9Y5I2 948 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 MYO15AQ9UKN7 3530 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 ARID2Q68CP9 1835 aa16.68■□□□□ 0.26
PNKP-202ENST00000593706 ESYT2A0FGR8 921 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 RBM10P98175 930 aaKnown RBP16.67■□□□□ 0.26
PNKP-202ENST00000593706 AKAP17AQ02040 695 aaKnown RBP16.67■□□□□ 0.26
PNKP-202ENST00000593706 APOBRQ0VD83 1088 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 DUSP6Q16828 381 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 PDE12Q6L8Q7 609 aaKnown RBP16.67■□□□□ 0.26
PNKP-202ENST00000593706 ABI1Q8IZP0 508 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 CRYGNQ8WXF5 182 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 RPGRIP1Q96KN7 1286 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 SCLT1Q96NL6 688 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 CDCA3Q99618 268 aaPredicted RBP16.67■□□□□ 0.26
PNKP-202ENST00000593706 PHF7Q9BWX1 381 aaPredicted RBP16.67■□□□□ 0.26
PNKP-202ENST00000593706 ZMYND12Q9H0C1 365 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 GABBR1Q9UBS5 961 aa16.67■□□□□ 0.26
PNKP-202ENST00000593706 MAFBQ9Y5Q3 323 aaPredicted RBP16.67■□□□□ 0.26
PNKP-202ENST00000593706 WDR64B1ANS9 1081 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 LOC730098B7Z3J9 87 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 HOXA2O43364 376 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 GPR32O75388 356 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 ZSCAN20P17040 1043 aaPredicted RBP16.66■□□□□ 0.26
PNKP-202ENST00000593706 TMOD1P28289 359 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 GNA11P29992 359 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 EVCP57679 992 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 NLRP11P59045 1033 aaKnown RBP16.66■□□□□ 0.26
PNKP-202ENST00000593706 ERVFC1P60507 584 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 BLOC1S2Q6QNY1 142 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 Q6ZUG5 572 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 LRRC43Q8N309 656 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 RNF169Q8NCN4 708 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 TCF25Q9BQ70 676 aa16.66■□□□□ 0.26
PNKP-202ENST00000593706 ELAC1Q9H777 363 aaKnown RBP16.66■□□□□ 0.26
PNKP-202ENST00000593706 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
PNKP-202ENST00000593706 DENND4AQ7Z401 1863 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 TMEM221A6NGB7 291 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 M0R296 226 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 MAGEB2O15479 319 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 PPM1AP35813 382 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 EFCAB12Q6NXP0 572 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 TRIM67Q6ZTA4 783 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms