RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ALADP13716 330 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 CIITAP33076 1130 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 NDUFV1P49821 464 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 CRYBB1P53674 252 aaPredicted RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 FAM189BP81408 668 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 KRT32Q14532 448 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 MIS18BP1Q6P0N0 1132 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 HFE2Q6ZVN8 426 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 TRMT1LQ7Z2T5 733 aaKnown RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 RNF135Q8IUD6 432 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 COLGALT1Q8NBJ5 622 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 ZNF668Q96K58 619 aaPredicted RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 JAKMIP1Q96N16 626 aaKnown RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 GLT8D2Q9H1C3 349 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 ADAMTS10Q9H324 1103 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 NCOA5Q9HCD5 579 aaKnown RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 VPS54Q9P1Q0 977 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 GABBR1Q9UBS5 961 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 NAP1L2Q9ULW6 460 aaPredicted RBP12.1□□□□□ -0.47
USE1-203ENST00000593597 DENND4AQ7Z401 1863 aa12.1□□□□□ -0.47
USE1-203ENST00000593597 LOC730098B7Z3J9 87 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 PER2O15055 1255 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 MSH4O15457 936 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 STBD1O95210 358 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 RPS6KB1P23443 525 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 PBX3P40426 434 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 SETQ01105 290 aaPredicted RBP12.09□□□□□ -0.47
USE1-203ENST00000593597 COASYQ13057 564 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 DRP2Q13474 957 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 KCNC3Q14003 757 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 NPY5RQ15761 445 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 PRR16Q569H4 304 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 HERC4Q5GLZ8 1057 aaPredicted RBP12.09□□□□□ -0.47
USE1-203ENST00000593597 SLC24A5Q71RS6 500 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 LRRC71Q8N4P6 559 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 CEP89Q96ST8 783 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 TYW1Q9NV66 732 aaKnown RBP12.09□□□□□ -0.47
USE1-203ENST00000593597 LRFN2Q9ULH4 789 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 USP15Q9Y4E8 981 aaPredicted RBP12.09□□□□□ -0.47
USE1-203ENST00000593597 ZDBF2Q9HCK1 2354 aa12.09□□□□□ -0.47
USE1-203ENST00000593597 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 TMEM150BA6NC51 233 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 M0R2N6 131 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 FGF18O76093 207 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 HMGB1P09429 215 aaKnown RBP12.08□□□□□ -0.48
USE1-203ENST00000593597 ATF7P17544 494 aaPredicted RBP12.08□□□□□ -0.48
USE1-203ENST00000593597 FGFR4P22455 802 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 EVCP57679 992 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 TOB2Q14106 344 aaPredicted RBP12.08□□□□□ -0.48
USE1-203ENST00000593597 DUSP6Q16828 381 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 B3GNT9Q6UX72 402 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
USE1-203ENST00000593597 TNPO1Q92973 898 aaKnown RBP12.08□□□□□ -0.48
USE1-203ENST00000593597 UNC45AQ9H3U1 944 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 C1orf112Q9NSG2 853 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 TMEM161AQ9NX61 479 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 CDH22Q9UJ99 828 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 FAM50BQ9Y247 325 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 PCDHA10Q9Y5I2 948 aa12.08□□□□□ -0.48
USE1-203ENST00000593597 C2orf16Q68DN1 1984 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 HIDE1A8MVS5 230 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 GPR182O15218 404 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 OATP04181 439 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 PSAPP07602 524 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 IFNAR1P17181 557 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
USE1-203ENST00000593597 GPC3P51654 580 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 NLRP11P59045 1033 aaKnown RBP12.07□□□□□ -0.48
USE1-203ENST00000593597 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
USE1-203ENST00000593597 PRKCEQ02156 737 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 CBX2Q14781 532 aaPredicted RBP12.07□□□□□ -0.48
USE1-203ENST00000593597 TARBP2Q15633 366 aaKnown RBP12.07□□□□□ -0.48
USE1-203ENST00000593597 CLLU1OSQ5K130 101 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 EFCAB12Q6NXP0 572 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 BLOC1S2Q6QNY1 142 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 ZNF598Q86UK7 904 aaKnown RBP12.07□□□□□ -0.48
USE1-203ENST00000593597 CKAP2LQ8IYA6 745 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 METTL13Q8N6R0 699 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 FEZF2Q8TBJ5 459 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 SUSD6Q92537 303 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 FBXL18Q96ME1 805 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 SLC26A6Q9BXS9 759 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 RNF26Q9BY78 433 aaPredicted RBP12.07□□□□□ -0.48
USE1-203ENST00000593597 ELAC1Q9H777 363 aaKnown RBP12.07□□□□□ -0.48
USE1-203ENST00000593597 C6orf50Q9HD87 102 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 MYO15AQ9UKN7 3530 aa12.07□□□□□ -0.48
USE1-203ENST00000593597 MYO10Q9HD67 2058 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 WDR64B1ANS9 1081 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 CHMP2AO43633 222 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 DTNBO60941 627 aa12.06□□□□□ -0.48
USE1-203ENST00000593597 CSDE1O75534 798 aaKnown RBP12.06□□□□□ -0.48
USE1-203ENST00000593597 TDP2O95551 362 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms