RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 MAFBQ9Y5Q3 323 aaPredicted RBP20.25■□□□□ 0.83
VAT1-208ENST00000590924 ZBTB42B2RXF5 422 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 GRM6O15303 877 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 STAG3L1P0CL83 205 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 PDIA4P13667 645 aaKnown RBP20.24■□□□□ 0.83
VAT1-208ENST00000590924 KRT2P35908 639 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 PRR16Q569H4 304 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 PTCRAQ6ISU1 281 aaPredicted RBP20.24■□□□□ 0.83
VAT1-208ENST00000590924 FAM178BQ8IXR5 827 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 KIAA0319LQ8IZA0 1049 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 RASGRP4Q8TDF6 673 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 BBXQ8WY36 941 aaPredicted RBP20.24■□□□□ 0.83
VAT1-208ENST00000590924 P2RX5Q93086 422 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 TMX1Q9H3N1 280 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 TCEAL9Q9UHQ7 104 aa20.24■□□□□ 0.83
VAT1-208ENST00000590924 GRXCR2A6NFK2 248 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 NCK2O43639 380 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 IL9P15248 144 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 LARP1BQ659C4 914 aaKnown RBP20.23■□□□□ 0.83
VAT1-208ENST00000590924 CKAP2LQ8IYA6 745 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 LENG9Q96B70 501 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 UIMC1Q96RL1 719 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 EPHX3Q9H6B9 360 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 ERVK-5Q9HDB9 667 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 CD320Q9NPF0 282 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 PCDHA10Q9Y5I2 948 aa20.23■□□□□ 0.83
VAT1-208ENST00000590924 MRPL42Q9Y6G3 142 aaKnown RBP20.23■□□□□ 0.83
VAT1-208ENST00000590924 H3BQ06 376 aaPredicted RBP20.22■□□□□ 0.83
VAT1-208ENST00000590924 RPS6KA5O75582 802 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 C22orf31O95567 290 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 PSAPP07602 524 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 HSP90AA1P07900 732 aaKnown RBP20.22■□□□□ 0.83
VAT1-208ENST00000590924 USP11P51784 963 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 NFX1Q12986 1120 aaKnown RBP20.22■□□□□ 0.83
VAT1-208ENST00000590924 TMEM266Q2M3C6 531 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 NAALADL2Q58DX5 795 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 ODR4Q5SWX8 454 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 DIS3L2Q8IYB7 885 aaKnown RBP20.22■□□□□ 0.83
VAT1-208ENST00000590924 TMEM40Q8WWA1 233 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 KHSRPQ92945 711 aaKnown RBP eCLIP20.22■□□□□ 0.834e-6■■■■□ 20.7
VAT1-208ENST00000590924 FOXP1Q9H334 677 aaPredicted RBP20.22■□□□□ 0.83
VAT1-208ENST00000590924 GINS2Q9Y248 185 aa20.22■□□□□ 0.83
VAT1-208ENST00000590924 SARSP49591 514 aaKnown RBP20.21■□□□□ 0.83
VAT1-208ENST00000590924 NONOQ15233 471 aaKnown RBP eCLIP20.21■□□□□ 0.832e-6■■■■□ 22.7
VAT1-208ENST00000590924 CTC1Q2NKJ3 1217 aa20.21■□□□□ 0.83
VAT1-208ENST00000590924 OXER1Q8TDS5 423 aa20.21■□□□□ 0.83
VAT1-208ENST00000590924 TNFRSF25Q93038 417 aa20.21■□□□□ 0.83
VAT1-208ENST00000590924 FAM167AQ96KS9 214 aa20.21■□□□□ 0.83
VAT1-208ENST00000590924 CDHR5Q9HBB8 845 aa20.21■□□□□ 0.83
VAT1-208ENST00000590924 CLDND1Q9NY35 253 aa20.21■□□□□ 0.83
VAT1-208ENST00000590924 PLAGL2Q9UPG8 496 aa20.21■□□□□ 0.83
VAT1-208ENST00000590924 CEP131Q9UPN4 1083 aa20.21■□□□□ 0.83
VAT1-208ENST00000590924 NOC2LQ9Y3T9 749 aaKnown RBP20.21■□□□□ 0.83
VAT1-208ENST00000590924 CCDC194A0A1B0GVG4 234 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 BTBD18B2RXH4 712 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 MGEA5O60502 916 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 PAN2Q504Q3 1202 aaKnown RBP20.2■□□□□ 0.82
VAT1-208ENST00000590924 GJD3Q8N144 294 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 C1orf112Q9NSG2 853 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
VAT1-208ENST00000590924 GABBR1Q9UBS5 961 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 RAPGEFL1Q9UHV5 662 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 LRFN2Q9ULH4 789 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 ST3GAL5Q9UNP4 418 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 FAM50BQ9Y247 325 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 C5orf42Q9H799 3197 aa20.2■□□□□ 0.82
VAT1-208ENST00000590924 WDR64B1ANS9 1081 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 H3BQV1 296 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 GPR182O15218 404 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 MAGEB2O15479 319 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 EDIL3O43854 480 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 U2AF2P26368 475 aaKnown RBP eCLIP20.19■□□□□ 0.82
VAT1-208ENST00000590924 LTBRP36941 435 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 CRYBB1P53674 252 aaPredicted RBP20.19■□□□□ 0.82
VAT1-208ENST00000590924 GUCY1B3Q02153 619 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 HYAL1Q12794 435 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 CAMK1Q14012 370 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 EP400NLQ6ZTU2 488 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 TBCKQ8TEA7 893 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 ADAM2Q99965 735 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 ALG13Q9NP73 1137 aaKnown RBP20.19■□□□□ 0.82
VAT1-208ENST00000590924 RGS18Q9NS28 235 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 SAMM50Q9Y512 469 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 PCDHB7Q9Y5E2 793 aa20.19■□□□□ 0.82
VAT1-208ENST00000590924 DENND3A2RUS2 1198 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 C9IYK1 514 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 PI4K2BG5E9Z4 385 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 MSH4O15457 936 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 GPR32O75388 356 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 ITGB1P05556 798 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 GATMP50440 423 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 FOSBP53539 338 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 NR5A1Q13285 461 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 KIZQ2M2Z5 673 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 MOXD1Q6UVY6 613 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 SLC24A5Q71RS6 500 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 FAM228AQ86W67 206 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 METTL13Q8N6R0 699 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 RIT2Q99578 217 aa20.18■□□□□ 0.82
VAT1-208ENST00000590924 OSMRQ99650 979 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms