RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 NOC2LQ9Y3T9 749 aaKnown RBP7.5□□□□□ -1.21
DNMT1-222ENST00000590619 GSTTP1A0A1W2PQM5 241 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 KANSL1LA0AUZ9 987 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 FOXP2O15409 715 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 RAB11FIP3O75154 756 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 RETP07949 1114 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 RLBP1P12271 317 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 INSRRP14616 1297 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 MARK3P27448 753 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 HOXA13P31271 388 aaPredicted RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 GBP2P32456 591 aaPredicted RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 PPM1AP35813 382 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 SP4Q02446 784 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 SNW1Q13573 536 aaKnown RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 WTAPQ15007 396 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 CSRP2Q16527 193 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 SOWAHCQ53LP3 525 aaPredicted RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 GPATCH4Q5T3I0 446 aaKnown RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 VPS52Q8N1B4 723 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 CELF5Q8N6W0 485 aaKnown RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 TMEM87AQ8NBN3 555 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 BBXQ8WY36 941 aaPredicted RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 SHDQ96IW2 340 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 DDX23Q9BUQ8 820 aaKnown RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 TMEM117Q9H0C3 514 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 ELAC1Q9H777 363 aaKnown RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 SFXN1Q9H9B4 322 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 WDR6Q9NNW5 1121 aaKnown RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 TMEM161AQ9NX61 479 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 MAP3K20Q9NYL2 800 aaKnown RBP7.49□□□□□ -1.21
DNMT1-222ENST00000590619 ANAPC4Q9UJX5 808 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 ST3GAL5Q9UNP4 418 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 PCDHA2Q9Y5H9 948 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 PCDHA1Q9Y5I3 950 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 IRAK3Q9Y616 596 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 CCDC171Q6TFL3 1326 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 KDM3AQ9Y4C1 1321 aa7.49□□□□□ -1.21
DNMT1-222ENST00000590619 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-222ENST00000590619 DENND3A2RUS2 1198 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 ZNF316A6NFI3 1004 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-222ENST00000590619 RRN3P2A6NIE6 340 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 ANHXE9PGG2 379 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 M0QZ92 97 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 LRP3O75074 770 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
DNMT1-222ENST00000590619 ZFYP08048 801 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-222ENST00000590619 CTSAP10619 480 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 LAMP2P13473 410 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 CD72P21854 359 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 CCND2P30279 289 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 TCF7P36402 384 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-222ENST00000590619 KRT76Q01546 638 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 FZD5Q13467 585 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 BMS1Q14692 1282 aaKnown RBP7.48□□□□□ -1.21
DNMT1-222ENST00000590619 SLC44A4Q53GD3 710 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 IL31Q6EBC2 164 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 LAIR1Q6GTX8 287 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 C15orf39Q6ZRI6 1047 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 FAM43BQ6ZT52 329 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-222ENST00000590619 ITPRIPQ8IWB1 547 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 SIRT2Q8IXJ6 389 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 NME8Q8N427 588 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 TMEM40Q8WWA1 233 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 CLDN23Q96B33 292 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 INPP4AQ96PE3 977 aaPredicted RBP7.48□□□□□ -1.21
DNMT1-222ENST00000590619 KLHL5Q96PQ7 755 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 OSBPL6Q9BZF3 934 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 ZBP1Q9H171 429 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 JMJD4Q9H9V9 463 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 ERAP1Q9NZ08 941 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 WASF3Q9UPY6 502 aa7.48□□□□□ -1.21
DNMT1-222ENST00000590619 CCDC195A0A1B0GUA6 201 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 GPR182O15218 404 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 ANP32CO43423 234 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 ATP9AO75110 1047 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 RPS6KA5O75582 802 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 KCNK5O95279 499 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 TDGF1P13385 188 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 NCLP19338 710 aaKnown RBP7.47□□□□□ -1.21
DNMT1-222ENST00000590619 METAP2P50579 478 aaKnown RBP eCLIP7.47□□□□□ -1.21
DNMT1-222ENST00000590619 CLCN4P51793 760 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 BCAR1P56945 870 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 GIT2Q14161 759 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 DSC3Q14574 896 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 UBXN2BQ14CS0 331 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 RRP12Q5JTH9 1297 aaKnown RBP7.47□□□□□ -1.21
DNMT1-222ENST00000590619 PPFIBP1Q86W92 1011 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 FCHSD1Q86WN1 690 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 TMEM173Q86WV6 379 aaPredicted RBP7.47□□□□□ -1.21
DNMT1-222ENST00000590619 SAMD3Q8N6K7 520 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 SEPT1Q8WYJ6 367 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 SENP7Q9BQF6 1050 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 MYL10Q9BUA6 226 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 FAM126AQ9BYI3 521 aaPredicted RBP7.47□□□□□ -1.21
DNMT1-222ENST00000590619 RAB23Q9ULC3 237 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 GINS2Q9Y248 185 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 NUMBLQ9Y6R0 609 aa7.47□□□□□ -1.21
DNMT1-222ENST00000590619 FNDC1Q4ZHG4 1894 aaPredicted RBP7.47□□□□□ -1.21
DNMT1-222ENST00000590619 SMIM35A0A1B0GVV1 85 aa7.46□□□□□ -1.22
DNMT1-222ENST00000590619 FIBPO43427 364 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms