RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ARID2Q68CP9 1835 aa23.77■■□□□ 1.4
ATG4D-212ENST00000590096 BRD1O95696 1058 aa23.77■■□□□ 1.4
ATG4D-212ENST00000590096 CXCL10P02778 98 aa23.77■■□□□ 1.4
ATG4D-212ENST00000590096 STK38Q15208 465 aa23.77■■□□□ 1.4
ATG4D-212ENST00000590096 FOXD4L6Q3SYB3 417 aaPredicted RBP23.77■■□□□ 1.4
ATG4D-212ENST00000590096 FOXD4L3Q6VB84 417 aaPredicted RBP23.77■■□□□ 1.4
ATG4D-212ENST00000590096 LINC01465Q8N7H1 131 aa23.77■■□□□ 1.4
ATG4D-212ENST00000590096 RNPC3Q96LT9 517 aaKnown RBP23.77■■□□□ 1.4
ATG4D-212ENST00000590096 IGKV6-21A0A0C4DH24 114 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 VTNP04004 478 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 MARCKSP29966 332 aaPredicted RBP23.76■■□□□ 1.39
ATG4D-212ENST00000590096 CDC25AP30304 524 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 LONP1P36776 959 aaKnown RBP23.76■■□□□ 1.39
ATG4D-212ENST00000590096 NASPP49321 788 aaPredicted RBP23.76■■□□□ 1.39
ATG4D-212ENST00000590096 GPNMBQ14956 572 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 CNKSR3Q6P9H4 555 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 OTOP2Q7RTS6 562 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 ZNF579Q8NAF0 562 aaKnown RBP23.76■■□□□ 1.39
ATG4D-212ENST00000590096 CELF4Q9BZC1 486 aaKnown RBP23.76■■□□□ 1.39
ATG4D-212ENST00000590096 DBR1Q9UK59 544 aaKnown RBP23.76■■□□□ 1.39
ATG4D-212ENST00000590096 KIAA1024Q9UPX6 916 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 GINS2Q9Y248 185 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 KDM3AQ9Y4C1 1321 aa23.76■■□□□ 1.39
ATG4D-212ENST00000590096 A0A087WWV3 80 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 GAS2O43903 313 aaKnown RBP23.75■■□□□ 1.39
ATG4D-212ENST00000590096 RARRES1P49788 294 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 EMC2Q15006 297 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 SLC39A14Q15043 492 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 ZRSR1Q15695 479 aaKnown RBP23.75■■□□□ 1.39
ATG4D-212ENST00000590096 ZNF710Q8N1W2 664 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 HERVK_113Q902F9 699 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 VWCEQ96DN2 955 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 CDK5RAP3Q96JB5 506 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 PPP1R16BQ96T49 567 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 DHX33Q9H6R0 707 aaKnown RBP23.75■■□□□ 1.39
ATG4D-212ENST00000590096 DDX19AQ9NUU7 478 aaKnown RBP23.75■■□□□ 1.39
ATG4D-212ENST00000590096 TFIP11Q9UBB9 837 aaKnown RBP23.75■■□□□ 1.39
ATG4D-212ENST00000590096 TET1Q8NFU7 2136 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 SIP14410 1827 aa23.75■■□□□ 1.39
ATG4D-212ENST00000590096 ZBBXA8MT70 800 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 DGAT1O75907 488 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 GHRP10912 638 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 UBA7P41226 1012 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 ECM1Q16610 540 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 ATL3Q6DD88 541 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 SEPT8Q92599 483 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 SCLT1Q96NL6 688 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 MTRQ99707 1265 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 MMTAG2Q9BU76 263 aaKnown RBP23.74■■□□□ 1.39
ATG4D-212ENST00000590096 NT5C3AQ9H0P0 336 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 ATP6V0A4Q9HBG4 840 aa23.74■■□□□ 1.39
ATG4D-212ENST00000590096 BMP2KQ9NSY1 1161 aaPredicted RBP23.74■■□□□ 1.39
ATG4D-212ENST00000590096 SRPRBQ9Y5M8 271 aaKnown RBP23.74■■□□□ 1.39
ATG4D-212ENST00000590096 MORC2Q9Y6X9 1032 aaPredicted RBP23.74■■□□□ 1.39
ATG4D-212ENST00000590096 ARHGEF35A5YM69 484 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 YEATS4O95619 227 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 NLRP11P59045 1033 aaKnown RBP23.73■■□□□ 1.39
ATG4D-212ENST00000590096 CDC42EP1Q00587 391 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 GRIN1Q05586 938 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 KIZQ2M2Z5 673 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 PLEKHG4Q58EX7 1191 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 FBXO47Q5MNV8 452 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 CABP7Q86V35 215 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 LINC00301Q8NCQ3 95 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 TCP11Q8WWU5 503 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 IFIH1Q9BYX4 1025 aaKnown RBP23.73■■□□□ 1.39
ATG4D-212ENST00000590096 SUCLA2Q9P2R7 463 aaPredicted RBP23.73■■□□□ 1.39
ATG4D-212ENST00000590096 FBXO2Q9UK22 296 aaPredicted RBP23.73■■□□□ 1.39
ATG4D-212ENST00000590096 DNM3Q9UQ16 869 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 ATP6V1DQ9Y5K8 247 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 SQORQ9Y6N5 450 aa23.73■■□□□ 1.39
ATG4D-212ENST00000590096 LOXHD1Q8IVV2 1947 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 LAMA3Q16787 3333 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 SPTLC2O15270 562 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 SLC26A4O43511 780 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 USO1O60763 962 aaKnown RBP23.72■■□□□ 1.39
ATG4D-212ENST00000590096 BAIAP3O94812 1187 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 CRYBB1P53674 252 aaPredicted RBP23.72■■□□□ 1.39
ATG4D-212ENST00000590096 MKRN4PQ13434 485 aaPredicted RBP23.72■■□□□ 1.39
ATG4D-212ENST00000590096 DRP2Q13474 957 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 LPIN1Q14693 890 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 TSHZ1Q6ZSZ6 1077 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 KRI1Q8N9T8 703 aaKnown RBP23.72■■□□□ 1.39
ATG4D-212ENST00000590096 USP38Q8NB14 1042 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 DBF4BQ8NFT6 615 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 RASSF8Q8NHQ8 419 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 APBB2Q92870 758 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 CALML4Q96GE6 196 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 CSRNP2Q9H175 543 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 CFAP45Q9UL16 551 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 ZDHHC9Q9Y397 364 aa23.72■■□□□ 1.39
ATG4D-212ENST00000590096 GPR32O75388 356 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 NUCB2P80303 420 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 IKBKEQ14164 716 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 HYIQ5T013 277 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 RHPN2Q8IUC4 686 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 KCTD17Q8N5Z5 321 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 NLRP7Q8WX94 980 aa23.71■■□□□ 1.39
ATG4D-212ENST00000590096 PSPC1Q8WXF1 523 aaKnown RBP23.71■■□□□ 1.39
ATG4D-212ENST00000590096 TMEM143Q96AN5 459 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms