RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 KIF1CO43896 1103 aaKnown RBP6.82□□□□□ -1.32
SMAD4-208ENST00000589706 RPS6KA4O75676 772 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CKMP06732 381 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 SYPP08247 313 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 PAMP19021 973 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 RAB27AP51159 221 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CBX1P83916 185 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 DSG1Q02413 1049 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CYP4F22Q6NT55 531 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 USHBP1Q8N6Y0 703 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 TTLL6Q8N841 843 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 RCBTB1Q8NDN9 531 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 MNS1Q8NEH6 495 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 RELTQ969Z4 430 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 SCARF2Q96GP6 870 aaPredicted RBP6.82□□□□□ -1.32
SMAD4-208ENST00000589706 PSMD1Q99460 953 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 MMP19Q99542 508 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 YIPF4Q9BSR8 244 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CELF4Q9BZC1 486 aaKnown RBP6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CABP5Q9NP86 173 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CRTAC1Q9NQ79 661 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 TRHDEQ9UKU6 1024 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 CEP83Q9Y592 693 aa6.82□□□□□ -1.32
SMAD4-208ENST00000589706 LTBP1Q14766 1721 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 THSD7BQ9C0I4 1608 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 WDR64B1ANS9 1081 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 AKAP10O43572 662 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 GAS7O60861 476 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 FKBP9O95302 570 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 HOXC9P31274 260 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 MAP2K2P36507 400 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 ADCYAP1R1P41586 468 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 SSR1P43307 286 aaKnown RBP6.81□□□□□ -1.32
SMAD4-208ENST00000589706 PCBP3P57721 371 aaKnown RBP6.81□□□□□ -1.32
SMAD4-208ENST00000589706 LRRC41Q15345 812 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 SYCP1Q15431 976 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 KIZQ2M2Z5 673 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 RTP2Q5QGT7 225 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 SYDE2Q5VT97 1194 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 FKBP9P1Q75LS8 142 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 ALYREFQ86V81 257 aaKnown RBP6.81□□□□□ -1.32
SMAD4-208ENST00000589706 TSPYL5Q86VY4 417 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-208ENST00000589706 CCDC146Q8IYE0 955 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 FAM9BQ8IZU0 186 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 EXOC6Q8TAG9 804 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 SSBP4Q9BWG4 385 aaPredicted RBP6.81□□□□□ -1.32
SMAD4-208ENST00000589706 SMC4Q9NTJ3 1288 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 B4GALT6Q9UBX8 382 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 SPEF1Q9Y4P9 236 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 DICER1Q9UPY3 1922 aaKnown RBP6.81□□□□□ -1.32
SMAD4-208ENST00000589706 INSRP06213 1382 aa6.81□□□□□ -1.32
SMAD4-208ENST00000589706 CD163L1Q9NR16 1453 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 TRBV23OR9-2A0A075B6M9 112 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 NPHP3-ACAD11A0A0J9YXS1 232 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 SSU72P8A0A1W2PR75 194 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 HMX2A2RU54 273 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 FAM170BA6NMN3 283 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 POLRMTO00411 1230 aaKnown RBP6.8□□□□□ -1.32
SMAD4-208ENST00000589706 GABRDO14764 452 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 FGF10O15520 208 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-208ENST00000589706 SCGB1D2O95969 90 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 SOD2P04179 222 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 CCDC172P0C7W6 258 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-208ENST00000589706 TM4SF1P30408 202 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 LSSP48449 732 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 AMPHP49418 695 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 FXR1P51114 621 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMAD4-208ENST00000589706 CYP27A1Q02318 531 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 ATP13A4Q4VNC1 1196 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 TMEM177Q53S58 311 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 CDKAL1Q5VV42 579 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 IQSEC1Q6DN90 963 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 ZNF765Q7L2R6 523 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 ZBTB46Q86UZ6 589 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 PASD1Q8IV76 773 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 CCAR1Q8IX12 1150 aaKnown RBP6.8□□□□□ -1.32
SMAD4-208ENST00000589706 SHISA5Q8N114 240 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 CHST14Q8NCH0 376 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 CHMP4CQ96CF2 233 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 C7orf69Q9H7B7 122 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 UPF2Q9HAU5 1272 aaKnown RBP6.8□□□□□ -1.32
SMAD4-208ENST00000589706 AASDHPPTQ9NRN7 309 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 TMOD3Q9NYL9 352 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 ZIM2Q9NZV7 527 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 CCDC39Q9UFE4 941 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 SRP68Q9UHB9 627 aaKnown RBP6.8□□□□□ -1.32
SMAD4-208ENST00000589706 TCFL5Q9UL49 500 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 RAXQ9Y2V3 346 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 PCDHA2Q9Y5H9 948 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 SCN4AP35499 1836 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 TONSLQ96HA7 1378 aa6.8□□□□□ -1.32
SMAD4-208ENST00000589706 E2F8A0AVK6 867 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 WASH4PA8MWX3 477 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 WNT9AO14904 365 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 GSTA4O15217 222 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 WIPF1O43516 503 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 PRKD3O94806 890 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 FBLN1P23142 703 aa6.79□□□□□ -1.32
SMAD4-208ENST00000589706 TPP2P29144 1249 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms