RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ZBTB42B2RXF5 422 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 DGAT1O75907 488 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 FAM13AO94988 1023 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 INHAP05111 366 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 ZNF131P52739 623 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 SOX10P56693 466 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 GJA9P57773 515 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 PSMD2Q13200 908 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 LRRC41Q15345 812 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 HERC4Q5GLZ8 1057 aaPredicted RBP12.53□□□□□ -0.4
VMP1-207ENST00000588131 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 DHX40Q8IX18 779 aaKnown RBP12.53□□□□□ -0.4
VMP1-207ENST00000588131 ADSSL1Q8N142 457 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 AOPEPQ8N6M6 819 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 BPIFA3Q9BQP9 254 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 UPF3AQ9H1J1 476 aaKnown RBP12.53□□□□□ -0.4
VMP1-207ENST00000588131 DHX33Q9H6R0 707 aaKnown RBP12.53□□□□□ -0.4
VMP1-207ENST00000588131 PDLIM7Q9NR12 457 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 ERAP1Q9NZ08 941 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 DACH1Q9UI36 760 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 CTNND2Q9UQB3 1225 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
VMP1-207ENST00000588131 H3BRB1 525 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 HBP1O60381 514 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 CAVIN2O95810 425 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 MYL3P08590 195 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 GAP43P17677 238 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 GRK4P32298 578 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 CPT1AP50416 773 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 CASP5P51878 434 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 POLGP54098 1239 aaPredicted RBP12.52□□□□□ -0.41
VMP1-207ENST00000588131 NCAPHQ15003 741 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 EMC2Q15006 297 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 FSCN1Q16658 493 aaKnown RBP12.52□□□□□ -0.41
VMP1-207ENST00000588131 FAM102BQ5T8I3 360 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 KLHL10Q6JEL2 608 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 MYCT1Q8N699 235 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 TRAPPC12Q8WVT3 735 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 KAT2BQ92831 832 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 FIZ1Q96SL8 496 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 TIPINQ9BVW5 301 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 NAT10Q9H0A0 1025 aaKnown RBP12.52□□□□□ -0.41
VMP1-207ENST00000588131 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
VMP1-207ENST00000588131 GRPEL1Q9HAV7 217 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 PARVGQ9HBI0 331 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 COL4A3BPQ9Y5P4 624 aa12.52□□□□□ -0.41
VMP1-207ENST00000588131 FRMPD3Q5JV73 1810 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 MYH11P35749 1972 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 ADAMTS4O75173 837 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 MAFO75444 373 aaPredicted RBP12.51□□□□□ -0.41
VMP1-207ENST00000588131 PGK1P00558 417 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 F2P00734 622 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 C6orf222P0C671 652 aaPredicted RBP12.51□□□□□ -0.41
VMP1-207ENST00000588131 MYBP10242 640 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 RARBP10826 455 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 INSRRP14616 1297 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 NMT1P30419 496 aaKnown RBP12.51□□□□□ -0.41
VMP1-207ENST00000588131 RFC5P40937 340 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 STX17P56962 302 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 NKX3-2P78367 333 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 COBLL1Q53SF7 1204 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 MCPH1Q8NEM0 835 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 SH3TC2Q8TF17 1288 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 PPP1R13LQ8WUF5 828 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 NELFBQ8WX92 580 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 BSNDQ8WZ55 320 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 ZBTB10Q96DT7 871 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 OLFML3Q9NRN5 406 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 DDX20Q9UHI6 824 aaKnown RBP12.51□□□□□ -0.41
VMP1-207ENST00000588131 ZNF215Q9UL58 517 aaPredicted RBP12.51□□□□□ -0.41
VMP1-207ENST00000588131 PTPN22Q9Y2R2 807 aa12.51□□□□□ -0.41
VMP1-207ENST00000588131 TRIM49BA6NDI0 452 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 HSPA8P11142 646 aaKnown RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 PLS3P13797 630 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 ERCC5P28715 1186 aaPredicted RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 PSEN2P49810 448 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 PMS1P54277 932 aaKnown RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 IGBP1P78318 339 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 PURAQ00577 322 aaKnown RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 PAK1Q13153 545 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 DRP2Q13474 957 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 MFSD10Q14728 455 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 CT47A1Q5JQC4 288 aaPredicted RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 ZNF484Q5JVG2 852 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 ODR4Q5SWX8 454 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 EPM2AIP1Q7L775 607 aaPredicted RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 GUF1Q8N442 669 aaKnown RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 SCFD1Q8WVM8 642 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 SLC7A3Q8WY07 619 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 TMEM143Q96AN5 459 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 GTPBP4Q9BZE4 634 aaKnown RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 POLR3FQ9H1D9 316 aaPredicted RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
VMP1-207ENST00000588131 XPNPEP3Q9NQH7 507 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 SEL1LQ9UBV2 794 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 PPME1Q9Y570 386 aa12.5□□□□□ -0.41
VMP1-207ENST00000588131 COL1A2P08123 1366 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms