RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 MAML3Q96JK9 1138 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 CEP170P1Q96L14 293 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 CAPNS2Q96L46 248 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 IFT74Q96LB3 600 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 SPATA33Q96N06 139 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 MTRQ99707 1265 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 THAP9Q9H5L6 903 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 C17orf75Q9HAS0 396 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 OLFML3Q9NRN5 406 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 NRBP2Q9NSY0 501 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.84□□□□□ -1.31
LIG3-206ENST00000586058 EXOC7Q9UPT5 735 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 MAPK8IP1Q9UQF2 711 aa6.84□□□□□ -1.31
LIG3-206ENST00000586058 ADGRA2Q96PE1 1338 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 CITO14578 2027 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 KCNJ18B7U540 433 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 SORBS3O60504 671 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 ATP9AO75110 1047 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 HIP1RO75146 1068 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 FARP2O94887 1054 aaPredicted RBP6.83□□□□□ -1.32
LIG3-206ENST00000586058 SLC34A2O95436 690 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 HOXC6P09630 235 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 HOXD10P28358 340 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 RFC5P40937 340 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 MTIF2P46199 727 aaKnown RBP6.83□□□□□ -1.32
LIG3-206ENST00000586058 TM4SF4P48230 202 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 RARRES1P49788 294 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 STAT5BP51692 787 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 ZNF75DP51815 510 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 GSDMDP57764 484 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 FANCCQ00597 558 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 CRHR2Q13324 411 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 LAMC2Q13753 1193 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 TRIM14Q14142 442 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 GIT2Q14161 759 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 KCNJ12Q14500 433 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 ECM1Q16610 540 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 MTERF2Q49AM1 385 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 HS1BP3Q53T59 392 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 CELF3Q5SZQ8 465 aaKnown RBP6.83□□□□□ -1.32
LIG3-206ENST00000586058 FKBP15Q5T1M5 1219 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 FAM102BQ5T8I3 360 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 CYP4F22Q6NT55 531 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 FOXR2Q6PJQ5 311 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 B3GNT9Q6UX72 402 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 MAMDC4Q6UXC1 1216 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 TRMT1LQ7Z2T5 733 aaKnown RBP6.83□□□□□ -1.32
LIG3-206ENST00000586058 CCDC60Q8IWA6 550 aaPredicted RBP6.83□□□□□ -1.32
LIG3-206ENST00000586058 TCP11Q8WWU5 503 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 BBXQ8WY36 941 aaPredicted RBP6.83□□□□□ -1.32
LIG3-206ENST00000586058 HVCN1Q96D96 273 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 DNAJC19Q96DA6 116 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 PPP1R9BQ96SB3 815 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 PTPN18Q99952 460 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 TINF2Q9BSI4 451 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 BEGAINQ9BUH8 593 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 SMARCAD1Q9H4L7 1026 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 TMEM206Q9H813 350 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 FANCLQ9NW38 375 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 ERAP1Q9NZ08 941 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 IFNKQ9P0W0 207 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 IMPACTQ9P2X3 320 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 PCDHGA4Q9Y5G9 962 aa6.83□□□□□ -1.32
LIG3-206ENST00000586058 ASTN1O14525 1302 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 FRMD3A2A2Y4 597 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 RASSF10A6NK89 507 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 FAM155AB1AL88 458 aaPredicted RBP6.82□□□□□ -1.32
LIG3-206ENST00000586058 PPP1R3GB7ZBB8 358 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 N4BP3O15049 544 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 CETN3O15182 167 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 RGS20O76081 388 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 CCNE2O96020 404 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 MAPTP10636 758 aaKnown RBP6.82□□□□□ -1.32
LIG3-206ENST00000586058 EPB41P11171 864 aaKnown RBP6.82□□□□□ -1.32
LIG3-206ENST00000586058 PLS3P13797 630 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 CPT1AP50416 773 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 DNM2P50570 870 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 PSMC6P62333 389 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 LSM11P83369 360 aaKnown RBP eCLIP6.82□□□□□ -1.32
LIG3-206ENST00000586058 FKBP3Q00688 224 aaKnown RBP6.82□□□□□ -1.32
LIG3-206ENST00000586058 PPP2R3AQ06190 1150 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 TBC1D8BQ0IIM8 1120 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 STRN3Q13033 797 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 STK4Q13043 487 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 EMC2Q15006 297 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 LY6KQ17RY6 165 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 EDRF1Q3B7T1 1238 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 UTP14CQ5TAP6 766 aaKnown RBP6.82□□□□□ -1.32
LIG3-206ENST00000586058 MFSD14CQ5VZR4 134 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 OLFML2BQ68BL8 750 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 IQSEC1Q6DN90 963 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 C17orf99Q6UX52 265 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 ABHD15Q6UXT9 468 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 USP37Q86T82 979 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 NELFCDQ8IXH7 590 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 SPC24Q8NBT2 197 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 RETREG2Q8NC44 543 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 KIAA0895Q8NCT3 520 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 CCDC150Q8NCX0 1101 aa6.82□□□□□ -1.32
LIG3-206ENST00000586058 OR6J1Q8NGC5 347 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms