RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 TBC1D22BQ9NU19 505 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 TMEM161AQ9NX61 479 aa16.44■□□□□ 0.22
SDF2-202ENST00000585428 USP15Q9Y4E8 981 aaPredicted RBP16.44■□□□□ 0.22
SDF2-202ENST00000585428 PLCB3Q01970 1234 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 DUSP6Q16828 381 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 KIZQ2M2Z5 673 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 MCTP2Q6DN12 878 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 ZNF746Q6NUN9 644 aaPredicted RBP16.43■□□□□ 0.22
SDF2-202ENST00000585428 LRRC55Q6ZSA7 311 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 TRIM67Q6ZTA4 783 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 FAM228AQ86W67 206 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 COLGALT1Q8NBJ5 622 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 VN1R2Q8NFZ6 395 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 SUSD6Q92537 303 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 CDCA3Q99618 268 aaPredicted RBP16.43■□□□□ 0.22
SDF2-202ENST00000585428 ZNF577Q9BSK1 485 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 PHF7Q9BWX1 381 aaPredicted RBP16.43■□□□□ 0.22
SDF2-202ENST00000585428 S1PR5Q9H228 398 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 HCSTQ9UBK5 93 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 LZTS1Q9Y250 596 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 PCDHA10Q9Y5I2 948 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 ATG2AQ2TAZ0 1938 aa16.43■□□□□ 0.22
SDF2-202ENST00000585428 KLF18A0A0U1RQI7 1052 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 ESYT2A0FGR8 921 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 GOLGA8AA7E2F4 631 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 GOLGA8BA8MQT2 603 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 VTNP04004 478 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 FGFR1P11362 822 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 ATF7P17544 494 aaPredicted RBP16.42■□□□□ 0.22
SDF2-202ENST00000585428 CIITAP33076 1130 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 ZXDAP98168 799 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 RBM10P98175 930 aaKnown RBP16.42■□□□□ 0.22
SDF2-202ENST00000585428 PKN1Q16512 942 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 SPOUT1Q5T280 376 aaKnown RBP16.42■□□□□ 0.22
SDF2-202ENST00000585428 SMAP1Q8IYB5 467 aaPredicted RBP16.42■□□□□ 0.22
SDF2-202ENST00000585428 LINC01465Q8N7H1 131 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 CASD1Q96PB1 797 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 OSMRQ99650 979 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 ADAMTS10Q9H324 1103 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 ATP6V0A4Q9HBG4 840 aa16.42■□□□□ 0.22
SDF2-202ENST00000585428 MUC6Q6W4X9 2439 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 TMEM221A6NGB7 291 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 M0R296 226 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 MAGEB2O15479 319 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 EDIL3O43854 480 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 PSAPP07602 524 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 HMGB1P09429 215 aaKnown RBP16.41■□□□□ 0.22
SDF2-202ENST00000585428 IBSPP21815 317 aaPredicted RBP16.41■□□□□ 0.22
SDF2-202ENST00000585428 KRT32Q14532 448 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 CKAP2LQ8IYA6 745 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 METTL13Q8N6R0 699 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 RASGRP4Q8TDF6 673 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 MRPS27Q92552 414 aaKnown RBP16.41■□□□□ 0.22
SDF2-202ENST00000585428 KCNB2Q92953 911 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 PBXIP1Q96AQ6 731 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 RNF19AQ9NV58 838 aa16.41■□□□□ 0.22
SDF2-202ENST00000585428 CCDC196A0A1B0GTZ2 297 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 FSD2A1L4K1 749 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 PRPF3O43395 683 aaKnown RBP16.4■□□□□ 0.22
SDF2-202ENST00000585428 IER5LQ5T953 404 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 EFCAB12Q6NXP0 572 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 THNSL1Q8IYQ7 743 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 ZNF710Q8N1W2 664 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 LENG9Q96B70 501 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 PPP1R16BQ96T49 567 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 TMEM117Q9H0C3 514 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 C6orf50Q9HD87 102 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 GABBR1Q9UBS5 961 aa16.4■□□□□ 0.22
SDF2-202ENST00000585428 ABCB7O75027 752 aa16.39■□□□□ 0.21
SDF2-202ENST00000585428 LAG3P18627 525 aa16.39■□□□□ 0.21
SDF2-202ENST00000585428 EIF4BP23588 611 aaKnown RBP16.39■□□□□ 0.21
SDF2-202ENST00000585428 NLRP11P59045 1033 aaKnown RBP16.39■□□□□ 0.21
SDF2-202ENST00000585428 SETQ01105 290 aaPredicted RBP16.39■□□□□ 0.21
SDF2-202ENST00000585428 SYCE2Q6PIF2 218 aa16.39■□□□□ 0.21
SDF2-202ENST00000585428 TRMT1LQ7Z2T5 733 aaKnown RBP16.39■□□□□ 0.21
SDF2-202ENST00000585428 FBXL16Q8N461 479 aa16.39■□□□□ 0.21
SDF2-202ENST00000585428 RPGRIP1Q96KN7 1286 aa16.39■□□□□ 0.21
SDF2-202ENST00000585428 PUF60Q9UHX1 559 aaKnown RBP16.39■□□□□ 0.21
SDF2-202ENST00000585428 CEP131Q9UPN4 1083 aa16.39■□□□□ 0.21
SDF2-202ENST00000585428 ZNF862O60290 1169 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 CPA1P15085 419 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 TMOD1P28289 359 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 GNA11P29992 359 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.21
SDF2-202ENST00000585428 CLCN3P51790 818 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 APOBRQ0VD83 1088 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 PRR16Q569H4 304 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 ANKRD54Q6NXT1 300 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 KCNT2Q6UVM3 1135 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 SKAP1Q86WV1 359 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 ECHDC2Q86YB7 292 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 REXO1Q8N1G1 1221 aaKnown RBP16.38■□□□□ 0.21
SDF2-202ENST00000585428 CCDC12Q8WUD4 166 aaPredicted RBP16.38■□□□□ 0.21
SDF2-202ENST00000585428 ASIC4Q96FT7 647 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 NGRNQ9NPE2 291 aaKnown RBP16.38■□□□□ 0.21
SDF2-202ENST00000585428 NRBP2Q9NSY0 501 aa16.38■□□□□ 0.21
SDF2-202ENST00000585428 A0A0U1RQF3 1178 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 HIDE1A8MVS5 230 aa16.37■□□□□ 0.21
SDF2-202ENST00000585428 HOXA2O43364 376 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms