RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 COL9A3Q14050 684 aaPredicted RBP11.82□□□□□ -0.52
CASC3-210ENST00000584997 RTN1Q16799 776 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 CREB3L3Q68CJ9 461 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 TYW1BQ6NUM6 668 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 SWSAP1Q6NVH7 229 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 ABHD15Q6UXT9 468 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 TRMT1LQ7Z2T5 733 aaKnown RBP11.82□□□□□ -0.52
CASC3-210ENST00000584997 SGMS1Q86VZ5 419 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 ZNF713Q8N859 430 aaPredicted RBP11.82□□□□□ -0.52
CASC3-210ENST00000584997 SUSD6Q92537 303 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 TCF25Q9BQ70 676 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 LSG1Q9H089 658 aaKnown RBP11.82□□□□□ -0.52
CASC3-210ENST00000584997 GLT8D2Q9H1C3 349 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 ANO2Q9NQ90 1003 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 TCEAL9Q9UHQ7 104 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 LZTS1Q9Y250 596 aa11.82□□□□□ -0.52
CASC3-210ENST00000584997 ZFHX2Q9C0A1 2572 aaPredicted RBP11.82□□□□□ -0.52
CASC3-210ENST00000584997 FSCN2O14926 492 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 HOXA2O43364 376 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 VTNP04004 478 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 SP100P23497 879 aaPredicted RBP11.81□□□□□ -0.52
CASC3-210ENST00000584997 PPM1AP35813 382 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 CRYBB1P53674 252 aaPredicted RBP11.81□□□□□ -0.52
CASC3-210ENST00000584997 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 PTPN21Q16825 1174 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 ANKRD54Q6NXT1 300 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 LLGL2Q6P1M3 1020 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 APOA5Q6Q788 366 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 NIPA1Q7RTP0 329 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 TMC7Q7Z402 723 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 FAM228AQ86W67 206 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 PLA2G4DQ86XP0 818 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 ABI1Q8IZP0 508 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 METTL13Q8N6R0 699 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
CASC3-210ENST00000584997 MRPS27Q92552 414 aaKnown RBP11.81□□□□□ -0.52
CASC3-210ENST00000584997 APOL5Q9BWW9 433 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 TMEM117Q9H0C3 514 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 CWH43Q9H720 699 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 ELAC1Q9H777 363 aaKnown RBP11.81□□□□□ -0.52
CASC3-210ENST00000584997 TSHZ2Q9NRE2 1034 aa11.81□□□□□ -0.52
CASC3-210ENST00000584997 V9GY48 417 aaPredicted RBP11.81□□□□□ -0.52
CASC3-210ENST00000584997 MYO10Q9HD67 2058 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 IPO5O00410 1097 aaKnown RBP11.8□□□□□ -0.52
CASC3-210ENST00000584997 ZBTB43O43298 467 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 ST18O60284 1047 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 C22orf31O95567 290 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 ZSCAN20P17040 1043 aaPredicted RBP11.8□□□□□ -0.52
CASC3-210ENST00000584997 HOXB8P17481 243 aaPredicted RBP11.8□□□□□ -0.52
CASC3-210ENST00000584997 VCPP55072 806 aaKnown RBP11.8□□□□□ -0.52
CASC3-210ENST00000584997 PLCB3Q01970 1234 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 KRT17Q04695 432 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 TCF15Q12870 199 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 NECTIN1Q15223 517 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 RNF20Q5VTR2 975 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 TMEM184AQ6ZMB5 413 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 RASGRP4Q8TDF6 673 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 ASIC4Q96FT7 647 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 ZNF558Q96NG5 402 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 MAP7D2Q96T17 732 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 IRF2BPLQ9H1B7 796 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 NGRNQ9NPE2 291 aaKnown RBP11.8□□□□□ -0.52
CASC3-210ENST00000584997 FAM86C1Q9NVL1 165 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 BARHL2Q9NY43 387 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 CEP131Q9UPN4 1083 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 AKT3Q9Y243 479 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 WDR81Q562E7 1941 aa11.8□□□□□ -0.52
CASC3-210ENST00000584997 PTPRZ1P23471 2315 aaPredicted RBP11.79□□□□□ -0.52
CASC3-210ENST00000584997 GOLGA8AA7E2F4 631 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 GOLGA8BA8MQT2 603 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 ZBTB42B2RXF5 422 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 FAM86B1E9PN63 330 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 DHX15O43143 795 aaKnown RBP11.79□□□□□ -0.52
CASC3-210ENST00000584997 PSAPP07602 524 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 FAM86B2P0C5J1 330 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 ATP4AP20648 1035 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 TMOD1P28289 359 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 AVPR2P30518 371 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 CA8P35219 290 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 PBX3P40426 434 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 CLK2P49760 499 aaKnown RBP11.79□□□□□ -0.52
CASC3-210ENST00000584997 CLCN3P51790 818 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 FAM189BP81408 668 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 SETQ01105 290 aaPredicted RBP11.79□□□□□ -0.52
CASC3-210ENST00000584997 KCNC3Q14003 757 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 TPRNQ4KMQ1 711 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 JAKMIP3Q5VZ66 844 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 KCNT2Q6UVM3 1135 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 ATOH1Q92858 354 aaPredicted RBP11.79□□□□□ -0.52
CASC3-210ENST00000584997 TCEANC2Q96MN5 208 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 CASD1Q96PB1 797 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 ZNF577Q9BSK1 485 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 S1PR5Q9H228 398 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 TBC1D22BQ9NU19 505 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 NR2E1Q9Y466 385 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 SAMM50Q9Y512 469 aa11.79□□□□□ -0.52
CASC3-210ENST00000584997 MAFBQ9Y5Q3 323 aaPredicted RBP11.79□□□□□ -0.52
CASC3-210ENST00000584997 USP34Q70CQ2 3546 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms