RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GABBR1Q9UBS5 961 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 HGSO14964 777 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 CAP2P40123 477 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 TUBB2AQ13885 445 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 ARSHQ5FYA8 562 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 P2RX7Q99572 595 aaKnown RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 TUBB2BQ9BVA1 445 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 ACP6Q9NPH0 428 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 RBM12Q9NTZ6 932 aaKnown RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 EMSYQ7Z589 1322 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 ZNF263O14978 683 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 ATMINO43313 823 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 EAPPQ56P03 285 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 ANGEL2Q5VTE6 544 aaKnown RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 SYT2Q8N9I0 419 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 AFAP1L1Q8TED9 768 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 POP1Q99575 1024 aaKnown RBP12.3□□□□□ -0.44
TOP3A-217ENST00000584582 WDR18Q9BV38 432 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 IDI2Q9BXS1 227 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 KMT5AQ9NQR1 393 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 SNX12Q9UMY4 172 aa12.3□□□□□ -0.44
TOP3A-217ENST00000584582 CCDC172P0C7W6 258 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 SREBF1P36956 1147 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 NT5C2P49902 561 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 LRRC55Q6ZSA7 311 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 DDX42Q86XP3 938 aaKnown RBP eCLIP12.29□□□□□ -0.44
TOP3A-217ENST00000584582 FAM76AQ8TAV0 307 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 CEP63Q96MT8 703 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 NUCKS1Q9H1E3 243 aaKnown RBP12.29□□□□□ -0.44
TOP3A-217ENST00000584582 DNAJC17Q9NVM6 304 aaKnown RBP12.29□□□□□ -0.44
TOP3A-217ENST00000584582 SLITRK3O94933 977 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 SEZ6Q53EL9 994 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 FAM160B2Q86V87 743 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 MCF2L2Q86YR7 1114 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 METTL13Q8N6R0 699 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 LMBR1Q8WVP7 490 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 IFT74Q96LB3 600 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 CBWD1Q9BRT8 395 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 EHD4Q9H223 541 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 TMX2Q9Y320 296 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 SNHG28P0DPA3 235 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 BCRP11274 1271 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 GGCXP38435 758 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 MXI1P50539 228 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 POLGP54098 1239 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-217ENST00000584582 USP14P54578 494 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 KCNMA1Q12791 1236 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 DMP1Q13316 513 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-217ENST00000584582 TMEM119Q4V9L6 283 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 RNF187Q5TA31 235 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-217ENST00000584582 IFT20Q8IY31 132 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 FUT8Q9BYC5 575 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 AMFRQ9UKV5 643 aa12.29□□□□□ -0.44
TOP3A-217ENST00000584582 MYH7P12883 1935 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 ROBO3Q96MS0 1386 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 DENND3A2RUS2 1198 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 H3BQF6 201 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 CALCAP01258 141 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 LIG4P49917 911 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 PLCB3Q01970 1234 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 HAUS6Q7Z4H7 955 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 ZBTB33Q86T24 672 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 PASD1Q8IV76 773 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 PI4K2AQ9BTU6 479 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 PLCB1Q9NQ66 1216 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 PLSCR1O15162 318 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 EVI5O60447 810 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 KRT19P08727 400 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 SPATA31C1P0DKV0 1188 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 GAP43P17677 238 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 QARSP47897 775 aaKnown RBP12.28□□□□□ -0.44
TOP3A-217ENST00000584582 SNX1Q13596 522 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 MUM1L1Q5H9M0 696 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 CEP85LQ5SZL2 805 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 FEM1BQ9UK73 627 aa12.28□□□□□ -0.44
TOP3A-217ENST00000584582 LRRIQ3A6PVS8 624 aaPredicted RBP12.27□□□□□ -0.44
TOP3A-217ENST00000584582 CDR2LQ86X02 465 aaPredicted RBP12.27□□□□□ -0.44
TOP3A-217ENST00000584582 CCDC114Q96M63 670 aa12.27□□□□□ -0.44
TOP3A-217ENST00000584582 FAM213AQ9BRX8 229 aa12.27□□□□□ -0.44
TOP3A-217ENST00000584582 CALCOCO1Q9P1Z2 691 aa12.27□□□□□ -0.44
TOP3A-217ENST00000584582 HACL1Q9UJ83 578 aa12.27□□□□□ -0.44
TOP3A-217ENST00000584582 SIK3Q9Y2K2 1263 aa12.27□□□□□ -0.44
TOP3A-217ENST00000584582 GOLGA6L10A0A0M3HER8 536 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 NOP56O00567 594 aaKnown RBP12.27□□□□□ -0.45
TOP3A-217ENST00000584582 RGL2O15211 777 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 SRGAP2CP0DJJ0 459 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
TOP3A-217ENST00000584582 SLC12A3P55017 1021 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 IRX3P78415 501 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-217ENST00000584582 RSRC2Q7L4I2 434 aaKnown RBP12.27□□□□□ -0.45
TOP3A-217ENST00000584582 SLC30A5Q8TAD4 765 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 GMCL1Q96IK5 515 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 SALL4Q9UJQ4 1053 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 UBR2Q8IWV8 1755 aa12.27□□□□□ -0.45
TOP3A-217ENST00000584582 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms