RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 GAS2O43903 313 aaKnown RBP20.34■□□□□ 0.85
RFFL-211ENST00000584541 CYP11B2P19099 503 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 KLRC1P26715 233 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 EMC2Q15006 297 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 POSTNQ15063 836 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 C1orf186Q6ZWK4 172 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 LMBR1Q8WVP7 490 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 TRAPPC12Q8WVT3 735 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 MTRQ99707 1265 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 RUSC1Q9BVN2 902 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 SENP6Q9GZR1 1112 aaPredicted RBP20.34■□□□□ 0.85
RFFL-211ENST00000584541 CLSTN2Q9H4D0 955 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 DHX33Q9H6R0 707 aaKnown RBP20.34■□□□□ 0.85
RFFL-211ENST00000584541 GTF2IRD1Q9UHL9 959 aa20.34■□□□□ 0.85
RFFL-211ENST00000584541 MYMKA6NI61 221 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 TRAK2O60296 914 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 MAFO75444 373 aaPredicted RBP20.33■□□□□ 0.85
RFFL-211ENST00000584541 GUCY2CP25092 1073 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 DNM2P50570 870 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 MTHFD1LQ6UB35 978 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 DYMQ7RTS9 669 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 SH3RF1Q7Z6J0 888 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 GRAMD1CQ8IYS0 662 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 PPP1R13LQ8WUF5 828 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 TCP11Q8WWU5 503 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 DDX12PQ92771 950 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 CEP89Q96ST8 783 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 C7orf25Q9BPX7 421 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 TUBE1Q9UJT0 475 aa20.33■□□□□ 0.85
RFFL-211ENST00000584541 GRIN2DO15399 1336 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 ARVCFO00192 962 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 TBCAO75347 108 aaKnown RBP20.32■□□□□ 0.84
RFFL-211ENST00000584541 C22orf31O95567 290 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 TMOD1P28289 359 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 ASIC1P78348 528 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 ARSHQ5FYA8 562 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 METTL13Q8N6R0 699 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 CCDC47Q96A33 483 aaKnown RBP20.32■□□□□ 0.84
RFFL-211ENST00000584541 TRIM9Q9C026 710 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 C11orf49Q9H6J7 331 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 ODF2LQ9ULJ1 636 aa20.32■□□□□ 0.84
RFFL-211ENST00000584541 MROH7Q68CQ1 1323 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 SMC2O95347 1197 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 HOXC8P31273 242 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 MNX1P50219 401 aaPredicted RBP20.31■□□□□ 0.84
RFFL-211ENST00000584541 RAD51AP2Q09MP3 1159 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 CAMK4Q16566 473 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 MARCH8Q5T0T0 291 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 CCDC183Q5T5S1 534 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 FAM102BQ5T8I3 360 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 EFCAB12Q6NXP0 572 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 CAVIN1Q6NZI2 390 aaKnown RBP20.31■□□□□ 0.84
RFFL-211ENST00000584541 CNNM4Q6P4Q7 775 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 MAEAQ7L5Y9 396 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 NECAB2Q7Z6G3 386 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 CCDC65Q8IXS2 484 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 SLC43A3Q8NBI5 491 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 DRC1Q96MC2 740 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 REEP2Q9BRK0 252 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 BLZF1Q9H2G9 400 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 SUGCTQ9HAC7 445 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 PDLIM7Q9NR12 457 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 NOD1Q9Y239 953 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 PCDHA2Q9Y5H9 948 aa20.31■□□□□ 0.84
RFFL-211ENST00000584541 NPHP3-ACAD11A0A0J9YXS1 232 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 MBLAC1A4D2B0 266 aaPredicted RBP20.3■□□□□ 0.84
RFFL-211ENST00000584541 HIP1RO75146 1068 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 FAM13AO94988 1023 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 CYP2C9P11712 490 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 IDEP14735 1019 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 ADAM17P78536 824 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 MDM2Q00987 491 aaPredicted RBP20.3■□□□□ 0.84
RFFL-211ENST00000584541 PNOCQ13519 176 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 CUL4BQ13620 913 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 GIT2Q14161 759 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 IER5Q5VY09 327 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 GDF6Q6KF10 455 aaPredicted RBP20.3■□□□□ 0.84
RFFL-211ENST00000584541 DIS3LQ8TF46 1054 aaKnown RBP20.3■□□□□ 0.84
RFFL-211ENST00000584541 KIFAP3Q92845 792 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 ABHD8Q96I13 439 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 PAWRQ96IZ0 340 aaKnown RBP20.3■□□□□ 0.84
RFFL-211ENST00000584541 ZHX3Q9H4I2 956 aa20.3■□□□□ 0.84
RFFL-211ENST00000584541 KIAA0100Q14667 2235 aaKnown RBP20.29■□□□□ 0.84
RFFL-211ENST00000584541 IGKV6-21A0A0C4DH24 114 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 TREHO43280 583 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 RPLP2P05387 115 aaKnown RBP20.29■□□□□ 0.84
RFFL-211ENST00000584541 PRR29P0C7W0 189 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 COL6A1P12109 1028 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 DPYDQ12882 1025 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 PTGISQ16647 500 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 TAF2Q6P1X5 1199 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 SLC39A5Q6ZMH5 540 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 LRRC71Q8N4P6 559 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 SMARCE1Q969G3 411 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 TMEM143Q96AN5 459 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 DNAJC19Q96DA6 116 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 MAP7D2Q96T17 732 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 XPNPEP1Q9NQW7 623 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 COL4A3BPQ9Y5P4 624 aa20.29■□□□□ 0.84
RFFL-211ENST00000584541 SMIM35A0A1B0GVV1 85 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms