RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 AGO3Q9H9G7 860 aaKnown RBP6.25□□□□□ -1.41
SMCHD1-208ENST00000583344 GOLGA6L22H0YM25 854 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 NARSO43776 548 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 HIP1RO75146 1068 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 APPP05067 770 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 HIBADHP31937 336 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 STAT3P40763 770 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 IRF9Q00978 393 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 ABHD18Q0P651 414 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 GRM7Q14831 915 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 TMEM177Q53S58 311 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 C2orf69Q8N8R5 385 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 ZSWIM2Q8NEG5 633 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 SHCBP1Q8NEM2 672 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 C8orf37Q96NL8 207 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 PLEKHG4BQ96PX9 1271 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 MAGEL2Q9UJ55 1249 aa6.24□□□□□ -1.41
SMCHD1-208ENST00000583344 SLC26A4O43511 780 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 KRT37O76014 449 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 APEX1P27695 318 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 RBL2Q08999 1139 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 ADAM15Q13444 863 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 ACAP1Q15027 740 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 KRTAP5-3Q6L8H2 238 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 RTN4RL1Q86UN2 441 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 CALML6Q8TD86 181 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 CACTINQ8WUQ7 758 aaKnown RBP6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 FOXRED1Q96CU9 486 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 TRIM39Q9HCM9 518 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 HECAQ9UBI9 543 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 PTCH2Q9Y6C5 1203 aa6.23□□□□□ -1.41
SMCHD1-208ENST00000583344 ZBTB48P10074 688 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 ALDH6A1Q02252 535 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 SAFB2Q14151 953 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 SGMS1Q86VZ5 419 aa6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 D2HGDHQ8N465 521 aa6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 JMYQ8N9B5 988 aa6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 THAP3Q8WTV1 239 aaPredicted RBP6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 ARMC5Q96C12 935 aa6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 MRPL4Q9BYD3 311 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 NELFAQ9H3P2 528 aa6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 MSL2Q9HCI7 577 aa6.22□□□□□ -1.41
SMCHD1-208ENST00000583344 RIN1Q13671 783 aa6.21□□□□□ -1.42
SMCHD1-208ENST00000583344 PMFBP1Q8TBY8 1022 aa6.21□□□□□ -1.42
SMCHD1-208ENST00000583344 BOCQ9BWV1 1114 aa6.21□□□□□ -1.42
SMCHD1-208ENST00000583344 NCOA5Q9HCD5 579 aaKnown RBP6.21□□□□□ -1.42
SMCHD1-208ENST00000583344 CTDP1Q9Y5B0 961 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-208ENST00000583344 CAPN14A8MX76 684 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 KCNQ2O43526 872 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 MCM7P33993 719 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 RGS3P49796 1198 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 ATP2C1P98194 919 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 HHEXQ03014 270 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 MAP3K12Q12852 859 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 C2orf27AQ580R0 203 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 SPTY2D1Q68D10 685 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 OTOP1Q7RTM1 612 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 FOXB1Q99853 325 aa6.2□□□□□ -1.42
SMCHD1-208ENST00000583344 M0R2C6 588 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 DVL2O14641 736 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 MAFO75444 373 aaPredicted RBP6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 RAPGEF3O95398 923 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 NPTXRO95502 500 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 TGFB2P61812 414 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 SLC6A3Q01959 620 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 FNDC7Q5VTL7 733 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 CC2D1AQ6P1N0 951 aaPredicted RBP6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 ADGRE4PQ86SQ3 457 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 LILRB2Q8N423 598 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 NEU4Q8WWR8 484 aaPredicted RBP6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 TRIM8Q9BZR9 551 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 GIT1Q9Y2X7 761 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 SH3BP1Q9Y3L3 701 aa6.19□□□□□ -1.42
SMCHD1-208ENST00000583344 CCDC163A0A0D9SF12 145 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 A0A1W2PRX2 142 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 GLRX3O76003 335 aaKnown RBP6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 PRLP01236 227 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 MECP2P51608 486 aaKnown RBP6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 KIF11P52732 1056 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 ANTXR2P58335 489 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 TUBA3CQ13748 450 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 TUBA3EQ6PEY2 450 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 KLHDC10Q6PID8 442 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 OR5AN1Q8NGI8 311 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 MKL1Q969V6 931 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 CHFRQ96EP1 664 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 CLUHP3Q96NS8 147 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 CEP72Q9P209 647 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 VWA7Q9Y334 891 aa6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 RBM8AQ9Y5S9 174 aaKnown RBP6.18□□□□□ -1.42
SMCHD1-208ENST00000583344 PMS2P1A4D2B8 440 aa6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 ADCY7P51828 1080 aa6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 ZCCHC8Q6NZY4 707 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 RABGGTAQ92696 567 aa6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 RPL10LQ96L21 214 aaKnown RBP6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 MMRN2Q9H8L6 949 aa6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 SAMD15Q9P1V8 674 aa6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 SAE1Q9UBE0 346 aaPredicted RBP6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 DENND2AQ9ULE3 1009 aa6.17□□□□□ -1.42
SMCHD1-208ENST00000583344 KRTAP23-1A1A580 65 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms