RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 COL13A1Q5TAT6 717 aaPredicted RBP10.6□□□□□ -0.71
RFFL-210ENST00000582308 CAVIN1Q6NZI2 390 aaKnown RBP10.6□□□□□ -0.71
RFFL-210ENST00000582308 CNNM4Q6P4Q7 775 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 DYMQ7RTS9 669 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 LMBR1Q8WVP7 490 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 DDX12PQ92771 950 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 ERCC4Q92889 916 aaPredicted RBP10.6□□□□□ -0.71
RFFL-210ENST00000582308 VTI1AQ96AJ9 217 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 DNAJC19Q96DA6 116 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 GLT1D1Q96MS3 346 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 CCDC43Q96MW1 224 aaKnown RBP10.6□□□□□ -0.71
RFFL-210ENST00000582308 TMEM106CQ9BVX2 250 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 NUP62CLQ9H1M0 184 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 BLZF1Q9H2G9 400 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 XPNPEP1Q9NQW7 623 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 BMP2KQ9NSY1 1161 aaPredicted RBP10.6□□□□□ -0.71
RFFL-210ENST00000582308 PPME1Q9Y570 386 aa10.6□□□□□ -0.71
RFFL-210ENST00000582308 NRCAMQ92823 1304 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 IGKV6-21A0A0C4DH24 114 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 MBLAC1A4D2B0 266 aaPredicted RBP10.59□□□□□ -0.71
RFFL-210ENST00000582308 RSPH10B2B2RC85 870 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 KLRC4O43908 158 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 MAFO75444 373 aaPredicted RBP10.59□□□□□ -0.71
RFFL-210ENST00000582308 DGAT1O75907 488 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 RSPH10BP0C881 870 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 GUCY2CP25092 1073 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 RFC5P40937 340 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 POLGP54098 1239 aaPredicted RBP10.59□□□□□ -0.71
RFFL-210ENST00000582308 TBC1D8BQ0IIM8 1120 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 MAPK7Q13164 816 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 MKRN4PQ13434 485 aaPredicted RBP10.59□□□□□ -0.71
RFFL-210ENST00000582308 DRP2Q13474 957 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 EMC2Q15006 297 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 CCDC183Q5T5S1 534 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 GDF6Q6KF10 455 aaPredicted RBP10.59□□□□□ -0.71
RFFL-210ENST00000582308 NFRKBQ6P4R8 1299 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 MTHFD1LQ6UB35 978 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 MAEAQ7L5Y9 396 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 SESTD1Q86VW0 696 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 DAW1Q8N136 415 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 C7orf31Q8N865 590 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 SLC43A3Q8NBI5 491 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 DIS3LQ8TF46 1054 aaKnown RBP10.59□□□□□ -0.71
RFFL-210ENST00000582308 REEP2Q9BRK0 252 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 LRRC27Q9C0I9 530 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 GPRC5CQ9NQ84 441 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 STARD7Q9NQZ5 370 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 KCND2Q9NZV8 630 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 GTF2IRD1Q9UHL9 959 aa10.59□□□□□ -0.71
RFFL-210ENST00000582308 A0A0U1RQG5 324 aaPredicted RBP10.58□□□□□ -0.72
RFFL-210ENST00000582308 C17orf102A2RUQ5 167 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 SFI1A8K8P3 1242 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 ARVCFO00192 962 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 MAGEB2O15479 319 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 TREHO43280 583 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 HIP1RO75146 1068 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 MYL1P05976 194 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 COL6A1P12109 1028 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 EN2P19622 333 aaPredicted RBP10.58□□□□□ -0.72
RFFL-210ENST00000582308 SARSP49591 514 aaKnown RBP10.58□□□□□ -0.72
RFFL-210ENST00000582308 CDK7P50613 346 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 CLCN3P51790 818 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 ASIC1P78348 528 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 CACNB1Q02641 598 aaPredicted RBP10.58□□□□□ -0.72
RFFL-210ENST00000582308 FAM47CQ5HY64 1035 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 EFCAB12Q6NXP0 572 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 RBM43Q6ZSC3 357 aaKnown RBP10.58□□□□□ -0.72
RFFL-210ENST00000582308 LRRC71Q8N4P6 559 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 LINC01465Q8N7H1 131 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 ANKLE1Q8NAG6 615 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 MCPH1Q8NEM0 835 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 SPATA20Q8TB22 786 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 SLC7A3Q8WY07 619 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 TMEM143Q96AN5 459 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 CCDC34Q96HJ3 373 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 CTAGE1Q96RT6 745 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 SENP6Q9GZR1 1112 aaPredicted RBP10.58□□□□□ -0.72
RFFL-210ENST00000582308 SUGCTQ9HAC7 445 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 ATP6V0A4Q9HBG4 840 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 HOOK1Q9UJC3 728 aaKnown RBP10.58□□□□□ -0.72
RFFL-210ENST00000582308 TUBE1Q9UJT0 475 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 PCDHA5Q9Y5H7 936 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 ALPK3Q96L96 1907 aa10.58□□□□□ -0.72
RFFL-210ENST00000582308 FRMD3A2A2Y4 597 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 RPN1P04843 607 aaKnown RBP10.57□□□□□ -0.72
RFFL-210ENST00000582308 KRT18P05783 430 aaKnown RBP10.57□□□□□ -0.72
RFFL-210ENST00000582308 GNAT1P11488 350 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 IDEP14735 1019 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 CAPN2P17655 700 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 ARL2P36404 184 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 ZNF131P52739 623 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 PTPN11Q06124 597 aaPredicted RBP10.57□□□□□ -0.72
RFFL-210ENST00000582308 FAM102BQ5T8I3 360 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 NT5DC1Q5TFE4 455 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 RUFY4Q6ZNE9 571 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 EXOC8Q8IYI6 725 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 KIAA0319LQ8IZA0 1049 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 METTL13Q8N6R0 699 aa10.57□□□□□ -0.72
RFFL-210ENST00000582308 PAWRQ96IZ0 340 aaKnown RBP10.57□□□□□ -0.72
RFFL-210ENST00000582308 JPH2Q9BR39 696 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms