RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 SKIDA1Q1XH10 827 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 FIGNQ5HY92 759 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 CREB3L3Q68CJ9 461 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 SLFN13Q68D06 897 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 USP51Q70EK9 711 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 C11orf74Q86VG3 221 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 NOSTRINQ8IVI9 506 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 GIMAP8Q8ND71 665 aaPredicted RBP6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 KLC2Q9H0B6 622 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 ZFP69BQ9UJL9 534 aa6.44□□□□□ -1.38
SMCHD1-205ENST00000581383 DVL2O14641 736 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 MATN3O15232 486 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 HIP1RO75146 1068 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 KATNA1O75449 491 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 PDGFRBP09619 1106 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 FAHP16930 419 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 TNFRSF1AP19438 455 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 SLC9A1P19634 815 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 OCRLQ01968 901 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 SEC23AQ15436 765 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 ZNF174Q15697 407 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 BRDTQ58F21 947 aaPredicted RBP6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 BTBD8Q5XKL5 378 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 SPRED1Q7Z699 444 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 STPG3Q8N7X2 389 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 TTLL11Q8NHH1 800 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 WDR48Q8TAF3 677 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 PCIF1Q9H4Z3 704 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 EMC7Q9NPA0 242 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 RIC8BQ9NVN3 520 aa6.43□□□□□ -1.38
SMCHD1-205ENST00000581383 FAM90A27PA6NNH2 459 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 CLASP2O75122 1294 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 PTPN1P18031 435 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 EPHA5P54756 1037 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 PFKPQ01813 784 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 ICAM4Q14773 271 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 TMEM132BQ14DG7 1078 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 GPR155Q7Z3F1 870 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 SPATS2Q86XZ4 545 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 KIAA1958Q8N8K9 716 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 NUDT10Q8NFP7 164 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 COG1Q8WTW3 980 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 NUDT11Q96G61 164 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 LRRC37BQ96QE4 947 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 ELF4Q99607 663 aaPredicted RBP6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 TYW1Q9NV66 732 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 ARHGAP28Q9P2N2 729 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 APOBEC2Q9Y235 224 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 B3GALT1Q9Y5Z6 326 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 WASHC2CQ9Y4E1 1318 aa6.42□□□□□ -1.38
SMCHD1-205ENST00000581383 H0Y858 1186 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 TGM5O43548 720 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 C6P13671 934 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 KIF11P52732 1056 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 ITKQ08881 620 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 IQSEC1Q6DN90 963 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 Q6ZUG5 572 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 HDGFL2Q7Z4V5 671 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 EFHBQ8N7U6 833 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 DTX3Q8N9I9 347 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 DLG3Q92796 817 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 TACO1Q9BSH4 297 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 CCDC8Q9H0W5 538 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 KCNH7Q9NS40 1196 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 TOMM22Q9NS69 142 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 TSC22D4Q9Y3Q8 395 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 SPO11Q9Y5K1 396 aa6.41□□□□□ -1.38
SMCHD1-205ENST00000581383 MUSKO15146 869 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 PTX3P26022 381 aaPredicted RBP6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 GJA4P35212 333 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 EPHB4P54760 987 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 EXOSC10Q01780 885 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 MTMR1Q13613 665 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 DDB1Q16531 1140 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 PLEKHG6Q3KR16 790 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 BROXQ5VW32 411 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 CD276Q5ZPR3 534 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 DPP8Q6V1X1 898 aaPredicted RBP6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 NECAB2Q7Z6G3 386 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 SLC5A5Q92911 643 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 MBD6Q96DN6 1003 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 LMF1Q96S06 567 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 CEP89Q96ST8 783 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 PTPN18Q99952 460 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 ADAM29Q9UKF5 820 aa6.4□□□□□ -1.38
SMCHD1-205ENST00000581383 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 PRAMEF25A6NGN4 478 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 C1QTNF3-AMACRE9PGA6 284 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 ACOT7O00154 380 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 GPR42O15529 346 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 AKAP8O43823 692 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 ZNF623O75123 536 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 C4BPAP04003 597 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 CHGBP05060 677 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 SELENOPP49908 381 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 PASD1Q8IV76 773 aa6.39□□□□□ -1.39
SMCHD1-205ENST00000581383 CNTD1Q8N815 330 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms