RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 TSGA10IPQ3SY00 556 aa11.67□□□□□ -0.54
GGA3-210ENST00000580799 FAM102BQ5T8I3 360 aa11.67□□□□□ -0.54
GGA3-210ENST00000580799 TMEM184AQ6ZMB5 413 aa11.67□□□□□ -0.54
GGA3-210ENST00000580799 COLGALT1Q8NBJ5 622 aa11.67□□□□□ -0.54
GGA3-210ENST00000580799 RASGRP4Q8TDF6 673 aa11.67□□□□□ -0.54
GGA3-210ENST00000580799 CCDC12Q8WUD4 166 aaPredicted RBP11.67□□□□□ -0.54
GGA3-210ENST00000580799 PBXIP1Q96AQ6 731 aa11.67□□□□□ -0.54
GGA3-210ENST00000580799 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
GGA3-210ENST00000580799 TMEM260Q9NX78 707 aa11.67□□□□□ -0.54
GGA3-210ENST00000580799 PUF60Q9UHX1 559 aaKnown RBP11.67□□□□□ -0.54
GGA3-210ENST00000580799 CEP131Q9UPN4 1083 aa11.67□□□□□ -0.54
GGA3-210ENST00000580799 MAFBQ9Y5Q3 323 aaPredicted RBP11.67□□□□□ -0.54
GGA3-210ENST00000580799 KLF18A0A0U1RQI7 1052 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 TMEM221A6NGB7 291 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 M0R296 226 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 MAGEB2O15479 319 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 PSAPP07602 524 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 HMGB1P09429 215 aaKnown RBP11.66□□□□□ -0.54
GGA3-210ENST00000580799 IBSPP21815 317 aaPredicted RBP11.66□□□□□ -0.54
GGA3-210ENST00000580799 PPM1AP35813 382 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 ERVFC1P60507 584 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 ZXDAP98168 799 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 PLCB3Q01970 1234 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 DSC3Q14574 896 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 DUSP6Q16828 381 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
GGA3-210ENST00000580799 BMP2KLQ5H9B9 411 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 FAM228AQ86W67 206 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 SUGP1Q8IWZ8 645 aaKnown RBP11.66□□□□□ -0.54
GGA3-210ENST00000580799 REXO1Q8N1G1 1221 aaKnown RBP11.66□□□□□ -0.54
GGA3-210ENST00000580799 METTL13Q8N6R0 699 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 SUSD6Q92537 303 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 FAM167AQ96KS9 214 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 OSMRQ99650 979 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 ZNF577Q9BSK1 485 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 ZMYND12Q9H0C1 365 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 C6orf50Q9HD87 102 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 PCDHGC5Q9Y5F6 944 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 PCDHA10Q9Y5I2 948 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 MYH9P35579 1960 aaKnown RBP11.66□□□□□ -0.54
GGA3-210ENST00000580799 TRIOO75962 3097 aa11.66□□□□□ -0.54
GGA3-210ENST00000580799 EVPLQ92817 2033 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 TECTAO75443 2155 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 FSCN2O14926 492 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 PER2O15055 1255 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 GPR32O75388 356 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 VTNP04004 478 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 FGFR1P11362 822 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 HOXB8P17481 243 aaPredicted RBP11.65□□□□□ -0.54
GGA3-210ENST00000580799 ATP4AP20648 1035 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 TMOD1P28289 359 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 GNA11P29992 359 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 CDC27P30260 824 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 PTPN5P54829 565 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 KRT17Q04695 432 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 SIGLEC14Q08ET2 396 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 KCNC3Q14003 757 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 JAKMIP3Q5VZ66 844 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 LRRC43Q8N309 656 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 FBXL6Q8N531 539 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 VN1R2Q8NFZ6 395 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
GGA3-210ENST00000580799 RPGRIP1Q96KN7 1286 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 MAP7D2Q96T17 732 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 CWH43Q9H720 699 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 NGRNQ9NPE2 291 aaKnown RBP11.65□□□□□ -0.54
GGA3-210ENST00000580799 FAM217BQ9NTX9 383 aaPredicted RBP11.65□□□□□ -0.54
GGA3-210ENST00000580799 KMT2EQ8IZD2 1858 aa11.65□□□□□ -0.54
GGA3-210ENST00000580799 ZSCAN20P17040 1043 aaPredicted RBP11.64□□□□□ -0.55
GGA3-210ENST00000580799 NLRP11P59045 1033 aaKnown RBP11.64□□□□□ -0.55
GGA3-210ENST00000580799 FGD1P98174 961 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 KCNT2Q6UVM3 1135 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 ABI1Q8IZP0 508 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 BICD2Q8TD16 824 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 TCEANC2Q96MN5 208 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 ZNF558Q96NG5 402 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 TCF25Q9BQ70 676 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 ENTPD7Q9NQZ7 604 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 HCSTQ9UBK5 93 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 AKT3Q9Y243 479 aa11.64□□□□□ -0.55
GGA3-210ENST00000580799 WDFY4Q6ZS81 3184 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 WDR81Q562E7 1941 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 WDR64B1ANS9 1081 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 EIF4BP23588 611 aaKnown RBP11.63□□□□□ -0.55
GGA3-210ENST00000580799 CIITAP33076 1130 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 ADD1P35611 737 aaKnown RBP11.63□□□□□ -0.55
GGA3-210ENST00000580799 METAP2P50579 478 aaKnown RBP eCLIP11.63□□□□□ -0.55
GGA3-210ENST00000580799 IRX6P78412 446 aaPredicted RBP11.63□□□□□ -0.55
GGA3-210ENST00000580799 RBM10P98175 930 aaKnown RBP11.63□□□□□ -0.55
GGA3-210ENST00000580799 PTPN21Q16825 1174 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 ADCK5Q3MIX3 580 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 PRR16Q569H4 304 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 PLPP4Q5VZY2 271 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 EFCAB12Q6NXP0 572 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 ANKRD54Q6NXT1 300 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 LINC01465Q8N7H1 131 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 PRSS33Q8NF86 280 aa11.63□□□□□ -0.55
GGA3-210ENST00000580799 RSPH1Q8WYR4 309 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms