RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ERCC5P28715 1186 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MAPK7Q13164 816 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ADSSL1Q8N142 457 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MYCT1Q8N699 235 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 WBP1LQ9NX94 342 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 CTNND2Q9UQB3 1225 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TRPC6Q9Y210 931 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PCDHA2Q9Y5H9 948 aa15.33■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SMTNL1A8MU46 457 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 GOLGA6L19H0YKK7 550 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SEPT4O43236 478 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 DUSP11O75319 330 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ZNF131P52739 623 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 POLGP54098 1239 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PRMT2P55345 433 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 UVSSAQ2YD98 709 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 BRDTQ58F21 947 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 FAM102BQ5T8I3 360 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 DAW1Q8N136 415 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PXYLP1Q8TE99 480 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ANP32BQ92688 251 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 DRC1Q96MC2 740 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 C16orf70Q9BSU1 422 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ATP6V0A4Q9HBG4 840 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ZNF215Q9UL58 517 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
CDK5RAP3-219ENST00000580670 HBP1O60381 514 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 CCND3P30281 292 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PPP1R2P41236 205 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 CPT1AP50416 773 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 STX17P56962 302 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MYL5Q02045 173 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PAK1Q13153 545 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 EMC2Q15006 297 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 LRRC41Q15345 812 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TARBP2Q15633 366 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 COBLL1Q53SF7 1204 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 DNAJC5GQ8N7S2 189 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 GLIS3Q8NEA6 775 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MCPH1Q8NEM0 835 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 CEP89Q96ST8 783 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 FGFBP2Q9BYJ0 223 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 RNPEPQ9H4A4 650 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MRPL44Q9H9J2 332 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 GPRC5CQ9NQ84 441 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PDLIM7Q9NR12 457 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SEL1LQ9UBV2 794 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PPME1Q9Y570 386 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SYNRGQ9UMZ2 1314 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MYH11P35749 1972 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 H3BRB1 525 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PSMA7O14818 248 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 IKBKBO14920 756 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 OFD1O75665 1012 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 RFC5P40937 340 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 BEX3Q00994 111 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ODR4Q5SWX8 454 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 GUF1Q8N442 669 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ENOX1Q8TC92 643 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SLC7A3Q8WY07 619 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 DHTKD1Q96HY7 919 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TUT1Q9H6E5 874 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 DHX33Q9H6R0 707 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 XPNPEP1Q9NQW7 623 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 OLFML3Q9NRN5 406 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 RWDD2AQ9UIY3 292 aa15.31■□□□□ 0.04
CDK5RAP3-219ENST00000580670 RARBP10826 455 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PLS3P13797 630 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SOX10P56693 466 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TBC1D8BQ0IIM8 1120 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 NCAPHQ15003 741 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MAP3K21Q5TCX8 1036 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 FAM178BQ8IXR5 827 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MYOCDQ8IZQ8 938 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SLAIN1Q8ND83 568 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MED15Q96RN5 788 aa15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 LARSQ9P2J5 1176 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ZBTB42B2RXF5 422 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 GCNT3O95395 438 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MYL3P08590 195 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 C6orf222P0C671 652 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 GJA9P57773 515 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PDLIM2Q96JY6 352 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 SPC25Q9HBM1 224 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 PTCH2Q9Y6C5 1203 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MAFO75444 373 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 KIF20AO95235 890 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 INHAP05111 366 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 MYBP10242 640 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 INSRRP14616 1297 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 CCNE1P24864 410 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 NMT1P30419 496 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 GRK4P32298 578 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 CASP5P51878 434 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 TPM4P67936 248 aa15.29■□□□□ 0.04
CDK5RAP3-219ENST00000580670 ZNF484Q5JVG2 852 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms