RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 BRPF3Q9ULD4 1205 aa22.05■■□□□ 1.12
LIMD2-209ENST00000580222 NOC2LQ9Y3T9 749 aaKnown RBP22.05■■□□□ 1.12
LIMD2-209ENST00000580222 PCDHA2Q9Y5H9 948 aa22.05■■□□□ 1.12
LIMD2-209ENST00000580222 RRN3P2A6NIE6 340 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 GOLGA8BA8MQT2 603 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 ZBTB43O43298 467 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 CALM1P0DP23 149 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 CALM2P0DP24 149 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 CALM3P0DP25 149 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 RXRAP19793 462 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 PBX3P40426 434 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 CWF19L1Q69YN2 538 aaKnown RBP22.04■■□□□ 1.12
LIMD2-209ENST00000580222 PDE12Q6L8Q7 609 aaKnown RBP22.04■■□□□ 1.12
LIMD2-209ENST00000580222 LRRC55Q6ZSA7 311 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 NLRX1Q86UT6 975 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 GIMAP8Q8ND71 665 aaPredicted RBP22.04■■□□□ 1.12
LIMD2-209ENST00000580222 CTCFLQ8NI51 663 aaPredicted RBP22.04■■□□□ 1.12
LIMD2-209ENST00000580222 TMEM40Q8WWA1 233 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 MRPS27Q92552 414 aaKnown RBP22.04■■□□□ 1.12
LIMD2-209ENST00000580222 RMDN1Q96DB5 314 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 ADAM2Q99965 735 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 AAASQ9NRG9 546 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 LIMD1Q9UGP4 676 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 NR2E1Q9Y466 385 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 EPG5Q9HCE0 2579 aa22.04■■□□□ 1.12
LIMD2-209ENST00000580222 C9IYK1 514 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 HOXB8P17481 243 aaPredicted RBP22.03■■□□□ 1.12
LIMD2-209ENST00000580222 KRT76Q01546 638 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 TROAPQ12815 778 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 PLCB4Q15147 1175 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 XRRA1Q6P2D8 792 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 GPRASP2Q96D09 838 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 LARP6Q9BRS8 491 aaKnown RBP22.03■■□□□ 1.12
LIMD2-209ENST00000580222 ADAM7Q9H2U9 754 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 RGS18Q9NS28 235 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 KDM3AQ9Y4C1 1321 aa22.03■■□□□ 1.12
LIMD2-209ENST00000580222 BAZ2BQ9UIF8 2168 aaKnown RBP22.02■■□□□ 1.12
LIMD2-209ENST00000580222 FSD2A1L4K1 749 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 GOLGA8AA7E2F4 631 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 NPR3P17342 541 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 CLCN5P51795 746 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 PLCB3Q01970 1234 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 TRAF1Q13077 416 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 C12orf76Q8N812 135 aaPredicted RBP22.02■■□□□ 1.12
LIMD2-209ENST00000580222 SMARCC2Q8TAQ2 1214 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 ENTPD7Q9NQZ7 604 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 LZTS1Q9Y250 596 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 HCFC2Q9Y5Z7 792 aa22.02■■□□□ 1.12
LIMD2-209ENST00000580222 M0QZ92 97 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 SRGAP2BP0DMP2 458 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 KIF5BP33176 963 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 METAP2P50579 478 aaKnown RBP eCLIP22.01■■□□□ 1.11
LIMD2-209ENST00000580222 RCAN1P53805 252 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 MCTP2Q6DN12 878 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 MAP3K14Q99558 947 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 RNF19AQ9NV58 838 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 GINS2Q9Y248 185 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 UBIAD1Q9Y5Z9 338 aa22.01■■□□□ 1.11
LIMD2-209ENST00000580222 PIK3CDO00329 1044 aa22■■□□□ 1.11
LIMD2-209ENST00000580222 FAM189BP81408 668 aa22■■□□□ 1.11
LIMD2-209ENST00000580222 RTN1Q16799 776 aa22■■□□□ 1.11
LIMD2-209ENST00000580222 MTHFD1LQ6UB35 978 aa22■■□□□ 1.11
LIMD2-209ENST00000580222 SLC24A5Q71RS6 500 aa22■■□□□ 1.11
LIMD2-209ENST00000580222 FLCNQ8NFG4 579 aa22■■□□□ 1.11
LIMD2-209ENST00000580222 MFSD1Q9H3U5 465 aa22■■□□□ 1.11
LIMD2-209ENST00000580222 ST3GAL5Q9UNP4 418 aa22■■□□□ 1.11
LIMD2-209ENST00000580222 MYO10Q9HD67 2058 aa21.99■■□□□ 1.11
LIMD2-209ENST00000580222 SMIM35A0A1B0GVV1 85 aa21.99■■□□□ 1.11
LIMD2-209ENST00000580222 KRT37O76014 449 aa21.99■■□□□ 1.11
LIMD2-209ENST00000580222 EVCP57679 992 aa21.99■■□□□ 1.11
LIMD2-209ENST00000580222 KIAA0319LQ8IZA0 1049 aa21.99■■□□□ 1.11
LIMD2-209ENST00000580222 CASD1Q96PB1 797 aa21.99■■□□□ 1.11
LIMD2-209ENST00000580222 NGRNQ9NPE2 291 aaKnown RBP21.99■■□□□ 1.11
LIMD2-209ENST00000580222 RBM28Q9NW13 759 aaKnown RBP21.99■■□□□ 1.11
LIMD2-209ENST00000580222 NID2Q14112 1375 aa21.99■■□□□ 1.11
LIMD2-209ENST00000580222 DENND3A2RUS2 1198 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 C2orf71A6NGG8 1288 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 CLASP2O75122 1294 aaKnown RBP21.98■■□□□ 1.11
LIMD2-209ENST00000580222 RPS6KA5O75582 802 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 RPLP2P05387 115 aaKnown RBP21.98■■□□□ 1.11
LIMD2-209ENST00000580222 LAG3P18627 525 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 PDIA3P30101 505 aaKnown RBP21.98■■□□□ 1.11
LIMD2-209ENST00000580222 STK3Q13188 491 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 MTMR1Q13613 665 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 ANGPT1Q15389 498 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 TPRNQ4KMQ1 711 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 KCNT2Q6UVM3 1135 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 TMC7Q7Z402 723 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 ZDHHC14Q8IZN3 488 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 MRPL43Q8N983 215 aaKnown RBP21.98■■□□□ 1.11
LIMD2-209ENST00000580222 FANCBQ8NB91 859 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 CASP10Q92851 521 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 ZNF274Q96GC6 653 aaPredicted RBP21.98■■□□□ 1.11
LIMD2-209ENST00000580222 PUF60Q9UHX1 559 aaKnown RBP21.98■■□□□ 1.11
LIMD2-209ENST00000580222 TPCN1Q9ULQ1 816 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 ZFHX4Q86UP3 3567 aa21.98■■□□□ 1.11
LIMD2-209ENST00000580222 KAT6AQ92794 2004 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 KLRC1P26715 233 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 GNAQP50148 359 aa21.97■■□□□ 1.11
LIMD2-209ENST00000580222 CCT2P78371 535 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms