RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 UCHL3P15374 230 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 CHN1P15882 459 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 ARL1P40616 181 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 MDM2Q00987 491 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 AP1ARQ63HQ0 302 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 RNF207Q6ZRF8 634 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 CASKIN2Q8WXE0 1202 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 SLITRK6Q9H5Y7 841 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 TTC7AQ9ULT0 858 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 GALCP54803 685 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 ARHGAP4P98171 946 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 NBPF9Q3BBW0 867 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 NAALADL2Q58DX5 795 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 TBC1D9BQ66K14 1250 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 C1orf54Q8WWF1 131 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 ANKS1AQ92625 1134 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 EDEM3Q9BZQ6 932 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 ARHGAP20Q9P2F6 1191 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 SYNGAP1Q96PV0 1343 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 BMP3P12645 472 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 PIK3CAP42336 1068 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 USP38Q8NB14 1042 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 RAB3IL1Q8TBN0 382 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 ACCSQ96QU6 501 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 VCX3BQ9H321 246 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 TXLNGQ9NUQ3 528 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 DBR1Q9UK59 544 aaKnown RBP14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 MAP7D1Q3KQU3 841 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 PACSIN1Q9BY11 444 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 YIPF3Q9GZM5 350 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 ETNK1Q9HBU6 452 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 CHORDC1Q9UHD1 332 aaPredicted RBP14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 CCPG1Q9ULG6 757 aa14.64□□□□□ -0.07
TRAPPC8-207ENST00000580104 LRRIQ4A6NIV6 560 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 GOLGA8SH3BPF8 625 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 PDHA1P08559 390 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 NT5DC1Q5TFE4 455 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 FAM196AQ6ZSG2 479 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 SPATA24Q86W54 205 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 TRIM6Q9C030 488 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 GLI1P08151 1106 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 GPC5P78333 572 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 ADGRA1Q86SQ6 560 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 CSRNP1Q96S65 589 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 DHX36Q9H2U1 1008 aaKnown RBP14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 ECT2Q9H8V3 914 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 CNOT8Q9UFF9 292 aaKnown RBP14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 MAD1L1Q9Y6D9 718 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 FAM205AQ6ZU69 1335 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 ITSN1Q15811 1721 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 CLRN2A0PK11 232 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 SMIM22K7EJ46 135 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 FAM107AO95990 144 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 NAB2Q15742 525 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 FBXL16Q8N461 479 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 RGL1Q9NZL6 768 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 MYCNP04198 464 aaPredicted RBP14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 AKR1B1P15121 316 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 NMT1P30419 496 aaKnown RBP14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 MAN1A1P33908 653 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 HSD17B3P37058 310 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 POLE2P56282 527 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 ZNF354CQ86Y25 554 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 RFFLQ8WZ73 363 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 DDX23Q9BUQ8 820 aaKnown RBP14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 SAYSD1Q9NPB0 183 aa14.63□□□□□ -0.07
TRAPPC8-207ENST00000580104 DIP2AQ14689 1571 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 MSH2P43246 934 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 SYDE2Q5VT97 1194 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 SLC35G2Q8TBE7 412 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 MYCBPAPQ8TBZ2 947 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 SLC40A1Q9NP59 571 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 OVOS2A0A0G2JMS6 1433 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 A0A0G2JND7 137 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 A0A1W2PQJ5 194 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 MIF4GDA9UHW6 222 aaKnown RBP14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 TCP11X1B4DZS4 312 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 KRT1P04264 644 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 INHBAP08476 426 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 QRICH1Q2TAL8 776 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 ARHGEF16Q5VV41 709 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 GJB7Q6PEY0 223 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 NEDD1Q8NHV4 660 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 GOLGA8MH3BSY2 632 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 STAM2O75886 525 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 PEX3P56589 373 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 SEC23AQ15436 765 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 AOC3Q16853 763 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 BBS9Q3SYG4 887 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 ZNF34Q8IZ26 560 aa14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 TGS1Q96RS0 853 aaKnown RBP14.62□□□□□ -0.07
TRAPPC8-207ENST00000580104 PLS3P13797 630 aa14.61□□□□□ -0.07
TRAPPC8-207ENST00000580104 GRAPQ13588 217 aa14.61□□□□□ -0.07
TRAPPC8-207ENST00000580104 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.61□□□□□ -0.07
TRAPPC8-207ENST00000580104 GRAPLQ8TC17 118 aaPredicted RBP14.61□□□□□ -0.07
TRAPPC8-207ENST00000580104 DYDC2Q96IM9 177 aa14.61□□□□□ -0.07
TRAPPC8-207ENST00000580104 CFAP57Q96MR6 1250 aa14.61□□□□□ -0.07
TRAPPC8-207ENST00000580104 DCTN4Q9UJW0 460 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms